Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5971 |
Symbol | |
ID | 4314875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 507916 |
End bp | 509589 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638153810 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_777849 |
Protein GI | 115360712 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.137563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGATG GAGCAACTGC CCGGGAGGTG CCGGCCTACG CCGACGCCGT GGCCGGCTTC CGTATCGAGA CCGCCACCGC ATATCTGCAC GGCGACCTGG AGCAGGGCCT GAACGCCTGC GTCGAATGCT GCGACCGGCA TGCGGCGGCG GACCCGAACG CGATCGCCCT CGACTGGATC GACGCTGGCG GCCGGCATCG CAGCTTCACG TTCGCGCAGA TGCAGGCGCT GTCGGCGCGC GTCGCGAACC TGCTGGTCGA GCAGGGTGTG AAGCCGGGTG ATGTGGTAGC CGGCCTGTTG CCGCGCACAC CCGAACTCGT CGCGACGATC CTCGGCACGT GGCGCGCGGG GGCCGTCTAC CAGCCGCTTT TCACAGCGTT CGGACCGAAG GCGATCGAGC ACCGGCTGCG CATGAGCGAT GCGCGGCTGA TCGTCACCAA CATCGCGAAT CGCGCGAAGC TCGACGAAAT CGTGGATTGC CCGCCGGTGG CGACGGTGCG CGAGCCGGGC GACACGCTGC CGGCCCGCGA CATCGATTTC CGTACGGCGC TCGACGCGCA GTCGGGCAGG TTCGAACCGG TGCTGCGCAA GGGGACCGAC CTGTTCATGA TGATGTCGAC GTCGGGCACG ACGGGTTTGC CGAAGGGCGT GCCGGTGCCG CTGCGCGCCC TGCTTGCGTT CGGCGCGTAC ATGCGCGACG CGGTGGACCT GCGCGACAGC GACCGCTTCT GGAACATCGC CGACCCCGGT TGGGCATACG GTCTCTACTA TGCGATCACG GGCCCGCTGC TGCTCGGCCA TGCGACGACG CTGTACGAAG GCAGCTTTAC CGTCGACAGC ACCTGCGACG TGATCGAACG GCTCGGCATC ACGAGCCTCG CCGGTTCTCC GACGGCGTAC CGGATGCTGA TGGCGGCCGG CACCGAAGTG GCGGCGCGGC TGAAAGGGCA ACTGCGCGTC GTCAGTAGCG CGGGCGAGCC GCTGAATCCG GAAGTCGTGC GCTGGTTCCA CGCGGCGCTC GGCGCGCCGA TCCACGATCA CTACGGCCAG ACCGAACTCG GGATGGTCGT GAACAACCAT CACGGGCTCA CGCACGTCGT CCATGTCGGT TCGGCCGGTC TCGCGATGCC CGGCTATCGC GTCGCGGTAC TCGACGAAGC CGGTCGCGAG CTGGGCCCGG GTGAGCCCGG CAACCTCGCC ATCGACATCG CACGCTCGCC GCTGCTGTGG TTCACCGGCT ACTGGCAGCA GGATACGCCG GCGATCGCGG GCGGCTACTA CCGGACCGGC GACAACGTCG AGCTCGAGCC GGACGGCACC GTGAGCTTCA TCGGCCGCGC GGACGACGTG ATCACGTCGT CCGGCTACCG GATCGGCCCG TTCGACGTGG AAAGCGCGCT GATCGAGCAT CCGGCCGTCA GCGAGGCCGC GGTGATAGGC GTGCCGGACC CGGAGCGCAC GGAGATCGTC AAGGCGTTCG TCGTGCTGTC GAAAGGCTTT GAAGGCACGC CGGCGCTGGC CGACGAACTG AGCCAGCACG TGAAGCGGCG GCTGTCGGCT CACGCGTATC CCCGCGCGAT CGACTTCGTC GACGCGCTGC CGAAAACCCC GAGCGGCAAG ATCCAGCGCT TCGTTCTGCG CAAGATGGAA GCCGAGAAGA CCGCTCAATC CTGA
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Protein sequence | MRDGATAREV PAYADAVAGF RIETATAYLH GDLEQGLNAC VECCDRHAAA DPNAIALDWI DAGGRHRSFT FAQMQALSAR VANLLVEQGV KPGDVVAGLL PRTPELVATI LGTWRAGAVY QPLFTAFGPK AIEHRLRMSD ARLIVTNIAN RAKLDEIVDC PPVATVREPG DTLPARDIDF RTALDAQSGR FEPVLRKGTD LFMMMSTSGT TGLPKGVPVP LRALLAFGAY MRDAVDLRDS DRFWNIADPG WAYGLYYAIT GPLLLGHATT LYEGSFTVDS TCDVIERLGI TSLAGSPTAY RMLMAAGTEV AARLKGQLRV VSSAGEPLNP EVVRWFHAAL GAPIHDHYGQ TELGMVVNNH HGLTHVVHVG SAGLAMPGYR VAVLDEAGRE LGPGEPGNLA IDIARSPLLW FTGYWQQDTP AIAGGYYRTG DNVELEPDGT VSFIGRADDV ITSSGYRIGP FDVESALIEH PAVSEAAVIG VPDPERTEIV KAFVVLSKGF EGTPALADEL SQHVKRRLSA HAYPRAIDFV DALPKTPSGK IQRFVLRKME AEKTAQS
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