Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5942 |
Symbol | |
ID | 4314847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 474743 |
End bp | 476293 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153782 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_777821 |
Protein GI | 115360684 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.050377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCC CGTATTTCCT GCGGCGCGCG GCGGCCTTCT GGGGTGACGT GCCCGCCGTG ATCCATCGCG ACCGCCCGCT CACTTACCGG CAACTCGAGG CGCGTTCGAA CCAGCTTGCG CACGCGCTTA TCGCCCTCGG TCTGCGGCGC GGCGACCGCG TGGCGGTGCA GTCGCGCAAC TGCACGGAAC TGGTCGAGAT CGAATGCGCG CTGTACAAGA CGGGTCTCGT GAAAGCGGCG CTCAACCCAC GCTTTACGAC GGCGGAAGCG TCGGACGTGG TGGAAAACTG CACGCCGCGC GTGCTGATCG CGGGCCGCGG CTATACGGGC TATACGCGCG CCACGCCGGG TTTTGCGAGC GTCGAGACGT TCATCGCCAT CGGCGGCGCC GAAGGCTATG TGGATTACGA AGCGCTGCTG GGGCGGGCCG CTTCGCACGC GCCGGATTTT GCCAGCCACG CGGACGATCT CGCCGTGCTG CATTTCTCGT CAGGCTCGAC CGGCAAGATC AAGGCCGCGA TGCAAAGCTA CGGCAACCGC ATGGCGTCGC TGCGCAAGCT GCTGATCGGC ATGGACACGC AGCCGCGCCC CGGCGACCGG CTCGCGCTCG TCGGGCCGAT TACGCATGCG TCGGGCATGC TCATGCAGCC GTTTCTCTAT TGCGGCGCCA CGCTCGTGCT GTTCGACGCA TTCGAGACCG CGCAATTTCT CGCCGATCTC GAACGCCTGC GCGTCACGCA CGTCTTCATG GTGCCCGCGA TGATCAACAT GCTGCTCAAC GAGCCTGCGC TCGCGCACAC CGACCTGAGC GCGCTGAAGT CGCTCTCGTA TGGCGCCGCG CCGATGGCCC CCGCGCGCAT TCAGGAGGCG TGGGCGCGCT TCGGGCCGAT TCTCTCGCAA GGCTATGGCG CGAGCGAATC GACCTCGGGC GTCACGCGTC TCACGATTGC GGACCACGCG TATGCGATCG CGCAGTGCCC GGAACGTCTC GCTTCGTGCG GGCGGCCGAT GGGCGAGACC GAAGTGTGCG TGCTCGGCGA AGACGGGCGG CCGCTGGCGG CGGGTGAAGT CGGCGAAATT GCCGTGCGCG GCGAGGACGT TTTCAAGGGC TACTGGGGCG CGCCCGAACT CACGGCCGAA GTGCTCGTGA ACGGCTGGCT GATGACGGGC GATCTCGCGC GCACCGATGA AGACGGCTAC CTGTATCTGG TCGACCGCAA GAAGGACATG ATCGTCTCGG GCGGCTTCAA CGTCTATCCG ACCGAGGTCG AGGCCGTGCT CTATCAGCAT CCCGACGTGC TCGAAGCCTG TGTGTTCAGC GTGCCCGACG AGCGCTGGGG CGAGGGCGTG AAAGCGGCGG TGGTGCTCAA GCCGCAACGC ACGGCGAATC AGGACGCGCT GGTCGCGCAT TGCCGCAGCC TGCTCGCCGA CTACAAGCTG CCGCGCTCGA TCAGTTTCGT CGCGGAACTG CCGCGCAACG CGAGCGGCAA GATCGCGCGC AAGATGGTGC GCGAACAGTA CTGGCAAGGC GCGGAGCGGC GCATCAACTG A
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Protein sequence | MSFPYFLRRA AAFWGDVPAV IHRDRPLTYR QLEARSNQLA HALIALGLRR GDRVAVQSRN CTELVEIECA LYKTGLVKAA LNPRFTTAEA SDVVENCTPR VLIAGRGYTG YTRATPGFAS VETFIAIGGA EGYVDYEALL GRAASHAPDF ASHADDLAVL HFSSGSTGKI KAAMQSYGNR MASLRKLLIG MDTQPRPGDR LALVGPITHA SGMLMQPFLY CGATLVLFDA FETAQFLADL ERLRVTHVFM VPAMINMLLN EPALAHTDLS ALKSLSYGAA PMAPARIQEA WARFGPILSQ GYGASESTSG VTRLTIADHA YAIAQCPERL ASCGRPMGET EVCVLGEDGR PLAAGEVGEI AVRGEDVFKG YWGAPELTAE VLVNGWLMTG DLARTDEDGY LYLVDRKKDM IVSGGFNVYP TEVEAVLYQH PDVLEACVFS VPDERWGEGV KAAVVLKPQR TANQDALVAH CRSLLADYKL PRSISFVAEL PRNASGKIAR KMVREQYWQG AERRIN
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