Gene Bamb_5918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5918 
Symbol 
ID4314823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp401424 
End bp402482 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content73% 
IMG OID638153758 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_777797 
Protein GI115360660 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00164429 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCACTGT TCTCCCCGTA CCAACTCGGC AATGTGAGCC TGCGCAATCG CATCGCGATC 
TCGCCGATCT GCGTCTACTC GGCCAGCGAG GGCGTGCCCG ACGACTGGCA CCTCGTGCAC
CTGGGCAGCC GCGCGATCGG CGGCGCGGGG CTGGTGTTCA CCGAGGCCAC CGCGGTATCG
CCCGAAGGGC GCATCACCTT CGGCTGCACG GGCATGTGGA ACGACACGCA GCGCGATGCC
TGGGCGCGCA TCACCGGCTT CGTGCGGGCC CGCGGCGCCG CCGTGGGCAT CCAGCTCGCG
CATGCGGGGC GCAAGGCCAG CATGGATTTG CCCTGGCTCG GCGGCAAGCC GCTGCCGGCC
GGCACGCTCG GCTGGCAGCC GCTCGGGCCC AGCCCGCTGG CCTTCGATGC CGGCTACAGC
GTGCCGACCG AGATCGATGC GGCCGGCATC GACAAGGTAA TCGCCGACTA CGCGGCGGCC
GCGCGCCGCG CGCGCGAGGC CGGCTTCGAC GTGATCGAGA TCCACGCCGC GCACGGCTAC
CTGTTCCACG AATTCCTCTC GCCGCTCTCG AACCGGCGCG GCGATCGTTA CGGCGGCGCG
CTCGAGAACC GCGCCCGCCT GCTGCGCCAG GTGGTGGCCG CGGTGCGCGA GCAGTGGCCG
CGCCGGAGGC CGCTGGTGGT GCGCCTGTCG GCGACGGACT GGATGCCGGG CGGCTGGGAC
ATCGAGGAAT GCGTCGCGTT GTGCCGCTGG CTGCGCGAGG ACGGCGTCGA CCTGATCGAC
ACCTCGTCGG GCGGCAATGT CGCGAGCGCG AAGATCCCGG TGGGCCAGGG CTACCAGGTG
CCGTTCGCCG CGCGCATCCG CCGCGAGGCC GGCATCGCGA CGGGCGCCGT CGGGATGATC
ACCTCGGGCC GGCGCGGCGC CGAGATCATC GAGCGCGGCG ATGCCGACCT CGTGCTGGTC
GCGCGCGAGG CGCTGCGCGA CCCCTACTTC CCGCGCCGCG CGGCCGCCGA GCTCGGCGTG
CCGATCGCGG TGCCCGAGCA GTACCTGCGC GCATGGTGA
 
Protein sequence
MSLFSPYQLG NVSLRNRIAI SPICVYSASE GVPDDWHLVH LGSRAIGGAG LVFTEATAVS 
PEGRITFGCT GMWNDTQRDA WARITGFVRA RGAAVGIQLA HAGRKASMDL PWLGGKPLPA
GTLGWQPLGP SPLAFDAGYS VPTEIDAAGI DKVIADYAAA ARRAREAGFD VIEIHAAHGY
LFHEFLSPLS NRRGDRYGGA LENRARLLRQ VVAAVREQWP RRRPLVVRLS ATDWMPGGWD
IEECVALCRW LREDGVDLID TSSGGNVASA KIPVGQGYQV PFAARIRREA GIATGAVGMI
TSGRRGAEII ERGDADLVLV AREALRDPYF PRRAAAELGV PIAVPEQYLR AW