| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5914 |
|---|
| Symbol | |
|---|
| ID | 4314819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 396586 |
|---|
| End bp | 397599 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638153754 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_777793 |
|---|
| Protein GI | 115360656 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.96705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00164429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA TACTCAGCAC CGTCGCGGGC GGCCCCGAGA CGCTCGCGCT GCACGAGGTG
CCCGAGCCGA TGCCGGGCGC CGGCCAGGTG CGCGTGCGCA TCGCCGCCTG CGCGCTCAAC
TATCCCGACC TGCTGGTGAT CCAGGACCGC TACCAGGACC GGCCCGAGCG GCCGTTCGCG
CCGGGCTCGG AAGTGGCCGG CGTGGTGGAT GCGGTGGGCG ACGGCGTGGC GGGGATCCGC
GTTGGCGATC GCGTGTTCGG CGCGACCGGT AATCGCGGCG GCCTGGCCGA GAAGATCACG
CTGCCCGCCG ACGGCTGCTT CGCGCTGCCG GCGGCGATGT CGTTCGACGA TGCCTCGGCC
CTGCTGCTGA CCTACGCGAC CATGATGCAC GCGCTCAAGG ACGCCGCGCG GCTCGCGGCG
GGCGAGACGC TACTGGTGCT CGGCGCGGCG GGCGGCATCG GCGTGGCGAG CGTGGAACTG
GGCAAGGCGA TGGGTGCGCG CGTGGTGGCG GTGGCCTCGT CGCGCGAGAA GGTCGACCTG
GCGCTGAGCC GCGGCGCCGA TGCCGGTGTG GTCTGCCCGG CCGGGCCGCT CGACCTGGAG
GCCGCCAAGG CCTTCAAGGA CGCTCTGCGC GCGGCCTGCG GGCCGCGCGG CGCCGACGTG
GTCTGCGATC CGGTGGGCGG CGATTACGCG GAAGCCGCGC TGCGTTCGCT GGCGTTCCAG
GGCCGCTACC TGGTGATCGG CTTCACGGCC GGGATTCCGC GGATCCCGCT CAACCTGGTG
CTGCTCAAGG CGGCCCGCAT GATCGGCGTG CTGTGGGGCG CGTTCGCGAG CGGCGAGGCG
CAGGCGAACC GGCGCAACGT GGAGGAGCTG GTGGCGTTCT ACGAGCGCGG GCTGATCCGG
CCGTTCATCT CGGCGCGGTT TCCGCTGGCG CAGGCGCCCG AGGCGCTGGC CGTACTTGCC
GAGCGCCGCG CGCTCGGCAA GGTGGTGGTG CGCTGCGACG AGGCGCTGGT CTGA
|
|---|
| Protein sequence | MKAILSTVAG GPETLALHEV PEPMPGAGQV RVRIAACALN YPDLLVIQDR YQDRPERPFA
PGSEVAGVVD AVGDGVAGIR VGDRVFGATG NRGGLAEKIT LPADGCFALP AAMSFDDASA
LLLTYATMMH ALKDAARLAA GETLLVLGAA GGIGVASVEL GKAMGARVVA VASSREKVDL
ALSRGADAGV VCPAGPLDLE AAKAFKDALR AACGPRGADV VCDPVGGDYA EAALRSLAFQ
GRYLVIGFTA GIPRIPLNLV LLKAARMIGV LWGAFASGEA QANRRNVEEL VAFYERGLIR
PFISARFPLA QAPEALAVLA ERRALGKVVV RCDEALV
|
|---|
| |