Gene Bamb_5814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5814 
Symbol 
ID4314720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp282813 
End bp283634 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content66% 
IMG OID638153655 
Productalpha/beta hydrolase fold 
Protein accessionYP_777694 
Protein GI115360557 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.086599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGT TCACGACACG CGACGGCGTC TCGATTCACT ACAAGGACTG GGGCGCGGGG 
CGCCCCGTCG TGTTCATTCA CGGCTGGCCG CTGAACGCGG ACATGTGGGA CGTCCAGATG
CATCATCTGG CATCGAACGG TTTTCGCGGC ATCGCGTACG ACCGGCGCGG TTTCGGCCGG
TCCGGCCAAC CGTGGACAGG CTACGACTAC GATACGCTCG CGGACGATCT CGCGACGCTG
ATCGAGACGC TCGGATTGCG CGACGTGACG CTCGTCGGCT TTTCGATGGG CGGCGGCGAG
GTGGCCCGAT ACATCGGCCG GCACGGCACG CGCCACATCG CGAAGGCCGT GCTGATCGGC
TCGGTGACGC CGCTCATCGC GCGGCGCGAC GATCATCCGG ACGGCGTCGA CGTCGCGATG
TTCGACGGCA TTCGCTCGGC GATCGTGGCG GACCGCGCCG CGTTCTTCGA GCAATTCTGG
CCGTTGTTCA CCGGCTCGAA CCGGGCGGAT TCGACGATCT CGCGCGCCAC GCTCGACTGG
ACGTCGTTCA TGGCGCTGCA GGCCGGATTG AAGGGCACGC TCGATTGCGT CCGCGCATTT
TCCGAAACCG ATTTCCGGGC GGATCTCGAC AAGTTCGACG TGCCGACGCG CGTGATTCAT
GGCGACGACG ACCAGACGGC ACCGCTCGCG CTGACGGCCG CGGCCACCGC CGCGCGCGTG
CCGGATGCGA CGCTGAGTGT TTACGAAGGC GGCCCGCATG CGCTGTATCT GACGCATGCC
CAACGATTGA ACGACGAACT GCTGGCGTTC GTCAGCGCGT GA
 
Protein sequence
MSTFTTRDGV SIHYKDWGAG RPVVFIHGWP LNADMWDVQM HHLASNGFRG IAYDRRGFGR 
SGQPWTGYDY DTLADDLATL IETLGLRDVT LVGFSMGGGE VARYIGRHGT RHIAKAVLIG
SVTPLIARRD DHPDGVDVAM FDGIRSAIVA DRAAFFEQFW PLFTGSNRAD STISRATLDW
TSFMALQAGL KGTLDCVRAF SETDFRADLD KFDVPTRVIH GDDDQTAPLA LTAAATAARV
PDATLSVYEG GPHALYLTHA QRLNDELLAF VSA