Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5812 |
Symbol | |
ID | 4314718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 279669 |
End bp | 280577 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153653 |
Product | LysR family transcriptional regulator |
Protein accession | YP_777692 |
Protein GI | 115360555 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.394289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.69254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGT CATTCGAAGC GCTCGAAGCG CTGGACGCGA TCGACCGTAC CGGCACGTTC GCCGAAGCTG CGGAACTGCT GCATCGCGTC CCATCGGCCC TGACTTACCT CGTGCACAAG CTCGAGGGCG ACCTCGGCGT CGCGCTGTTC GACCGCAGCG GACGCCGTGC GAAGCTCACG CATGCGGGTC GCGTCGTCGT CGAAGAAGGC CGGCGGCTGC TGCATGCGGC CGAGCAGCTC GAACTCAAGG CGCAGCGCGC GCAGCAAGGC TGGGAAACCG AGCTGCGCAT CTGTATCGAC GAGATCCTGC CGTTCGACGC GCTATGGCCC CACGTGCATG CGTTCTACGG GCTCGAAATG GACACGCGGC TGCGGCTCTC GACCGAAGTC CTCGGTGGTA CGTGGGACGC GCTGGTAGCG CGCCGCGCGG ATCTCGTCGT CGGCGCGACG GGCGAGCCGC CGGAGCTGCC GGGCATCGTC ACGCGGCCGA TCGGCACGCT CAGGCACGTG TTCGCAATCG CGCCCACCCA TCCGCTCGCG GCCCTGCCCG AACCGCTGTC GATGGCGTCG ATCGTCGAGT ATCGCGGCGC CGTGATCAGC GACACGTCCC GCGAACTGCA GCCGCGCTCG ATCGCTGTCG ATGCCGGGCA GCCGACGCTC GCGGTCCCTA CCCTCGCGGC CAAACTGGCC GCGCAGTGCG AAGGGCTCGC CGTGGGCACG CTGCCGGACT GCATCGCGGC GCGCGCGATC GCACAGGGCA AGCTCGTCGC ACGCCAGGTG ACCGGCATGC GCGACACGAC GCATTGCTAC ATGGCGTGGC GCGCCGACGA AGCCGGCCGC GCGTTGCGCT GGTGGGTCGA GCAGCTCGAT CGCCCCGATC TCGTCGACCG GTTTCTCGCG CTTGCGTGA
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Protein sequence | MKLSFEALEA LDAIDRTGTF AEAAELLHRV PSALTYLVHK LEGDLGVALF DRSGRRAKLT HAGRVVVEEG RRLLHAAEQL ELKAQRAQQG WETELRICID EILPFDALWP HVHAFYGLEM DTRLRLSTEV LGGTWDALVA RRADLVVGAT GEPPELPGIV TRPIGTLRHV FAIAPTHPLA ALPEPLSMAS IVEYRGAVIS DTSRELQPRS IAVDAGQPTL AVPTLAAKLA AQCEGLAVGT LPDCIAARAI AQGKLVARQV TGMRDTTHCY MAWRADEAGR ALRWWVEQLD RPDLVDRFLA LA
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