Gene Bamb_5772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5772 
Symbol 
ID4314679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp241140 
End bp242813 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content65% 
IMG OID638153614 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_777653 
Protein GI115360516 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.412443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCACAC AGGACTTGCT CGCGCAATAC GGCCCGCGCG AATCGATGGA ATACGACGTC 
GTGATCGTCG GCGGCGGCCC CGCCGGGCTG TCGGCGGCGA TCCGGCTCAA GCAGCTGGCC
GCCGAGAAAG GCACCGAGAT CGGCGTGTGC GTGCTCGAGA AGGGTTCCGA GATCGGCGCG
CACATCCTGT CGGGCGCGGT GATGGACCCG CGCGCGATCA CCGAACTGTT CCCCGACTGG
AAGGAACGCG GCGCGCCGCT CGATGTCGCG GTGACGGAAG ATCGCTTCCT GTTCCTGTCC
GAGAACAGCG CGGTCACCAC GCCCAACTGG GCGCTGCCCG CCAACTTCCA GAACCACGGC
AACTACGTGA TCTCGCTGGG CAACGTCACG CGCTGGCTGG GGGCACAGGC CGAAGCGCTG
GGCGTCGAGA TCTTCCCGGG CTTCCCGGCC GCCGAGATTC TCTACAACGA CGACGGCTCG
GTGAAGGGCG TCGCCACCGG CAACATGGGT GTGGGCAAGG ACGGCGAGCC GACCGAGAAC
TTCCAGCTCG GCATGGAGCT GCACGCGAAG TACACGCTGT TCGCCGAAGG CTGCCGCGGC
CACCTCGGCC GTCAGCTGAT CTCGAAGTTC AAGCTCGACG CGAACGCGGA TCCGCAGGCG
TACGGGATCG GCATCAAGGA GCTGTGGGAG ATCGATCCGG CCAAGCACAA GCCGGGCCTC
GTGATCCACA CGGCCGGCTG GCCGCTGAAG TCCGATACGT ACGGCGGCTC GTTCCTGTAT
CACATGGACA ACAACCAGGT GGTGGTCGGC TTCGTGGTGG GCCTCGGCTA CACGAACCCG
TACCTGTCGC CGTTCGAGGA ATTCCAGCGC TACAAGACGC ATCCGTCGAT CCGCGCGTTC
CTCGAAGGCG GCAAGCGCGT GTCGTACGGC GCGCGCGCGA TCACGGCGGG CGGCCTGCTG
TCGCTGCCGA AGACGGTGTT CCCGGGCGGC GCGCTGATCG GCGACGATGC GGGCTTCCTG
AACGCGTCGC GGATCAAGGG CAGCCACGCG GCGATCAAGA CCGGCATGCT GGCGGCCGAT
GCTGCATTCG ACGCAGTGCA GGCCGGGCGC CAGAGCGATG AGCTCAATGC GTATCCGGAC
GCCTTCAAGC AATCGTGGCT GTACACGGAG CTGTACCGCG CGCGCAACTT CAAGCAATGG
ATGGCCAAGG GGCTGTATCT CGGCACGCTG ATGGTCGGGC TCGAGCAGAA GGTGATGGGT
GGCAACGTGC CGTGGACGCT GCACCACAAG CATGCGGATC ACGAGATGCT GAAGCCCGCA
TCGGAATACA CGCCGATCGA GTATCCGAAG CCGGACGGCA AGCTGACGTT CGACCGGCTG
TCGTCGGTGT TCATCTCGAA CACGAACCAC GAGGAGAACC AGCCGGCGCA TCTGACGCTG
AAGGATGCGA GCGTGCCGGT GAACGTGAAC CTGCGCACGT ACGCGGGGCC GGAGGCCCGC
TTTTGCCCGG CGGCCGTGTA CGAGTTCGTG AAGAACGACG ACGGCGGCGA TCGGCTGGTA
ATCAACGCGC AGAACTGCGT GCACTGCAAG ACCTGCGACA TCAAGGACCC GACGCAGAAC
ATCGTGTGGG TCACGCCGGA AGGCGGTGGC GGGCCGAATT ACCCGAACAT GTAA
 
Protein sequence
MTTQDLLAQY GPRESMEYDV VIVGGGPAGL SAAIRLKQLA AEKGTEIGVC VLEKGSEIGA 
HILSGAVMDP RAITELFPDW KERGAPLDVA VTEDRFLFLS ENSAVTTPNW ALPANFQNHG
NYVISLGNVT RWLGAQAEAL GVEIFPGFPA AEILYNDDGS VKGVATGNMG VGKDGEPTEN
FQLGMELHAK YTLFAEGCRG HLGRQLISKF KLDANADPQA YGIGIKELWE IDPAKHKPGL
VIHTAGWPLK SDTYGGSFLY HMDNNQVVVG FVVGLGYTNP YLSPFEEFQR YKTHPSIRAF
LEGGKRVSYG ARAITAGGLL SLPKTVFPGG ALIGDDAGFL NASRIKGSHA AIKTGMLAAD
AAFDAVQAGR QSDELNAYPD AFKQSWLYTE LYRARNFKQW MAKGLYLGTL MVGLEQKVMG
GNVPWTLHHK HADHEMLKPA SEYTPIEYPK PDGKLTFDRL SSVFISNTNH EENQPAHLTL
KDASVPVNVN LRTYAGPEAR FCPAAVYEFV KNDDGGDRLV INAQNCVHCK TCDIKDPTQN
IVWVTPEGGG GPNYPNM