| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5768 |
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| Symbol | |
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| ID | 4314675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 232797 |
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| End bp | 236675 |
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| Gene Length | 3879 bp |
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| Protein Length | 1292 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153610 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_777649 |
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| Protein GI | 115360512 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCCG GCCGGCGTCA GGCCGCTGCT CGCTGTTTTC ATTCCTCTTC CGACGACATC
ATGACCACTG CGACCTTGCC GACCACGCTT AGCGAATTGC TTCAGAACCG GGCCGCCACA
CTCGGCGACA AAACCGCCTA CGTGTTCCTG AGCGGACCGC CCGAACAGGA ACAGGCCGAA
TCGATGACCT TCGCGGAACT CGACGCACGC GCTCGCCGGG TCGCCGCGCT GCTGCAGCAG
AACGCGATCG ACATCGGCGA CCGGGTCCTG CTGCTGTGCC GGCCGGGGCT CGACTATGTC
AGCGCCTTCA TGGGGTGCCT GTATGCGGGC GCGATCGCAG TTCCCGTCTA CCCGCCGCGC
AACAAGCAGC ATATGGTGCG GATCGCCGGC ATCGTCGAGA ACGCAGGCGC GAACACGATT
CTGTGTTCGG CCGAGGACCA TGCGCGCTGC GCGACCTGGC TTGCCGATAC CGACGCATCC
GGCAGCACGC TGCTCGACGT CGGGGGCGCG CAGGTGCTGG ATCCCGTGCC TTCGCCCGCC
AGCGTGCAGC CATCCCGGAT CGCCTTTCTG CAATACACGT CGGGAACCAC CGGCAGCCCC
AAGGGCGTGA TGGTGTCGCA CGGCAACCTG ATGCATAACC TGGGGCTGAT GCGCGAATGG
CTCGCCTACG ACGAGCAGAG CACGATCGTC AGCTGGCTGC CGCCATACCA CGACATGGGC
CTGATCGGCG TGATCCTGAC GTCGCTCTAC GGCGGCTTCC GGAGCGTGCT GATGGCCCCG
GAACGCTTCA TCCAGCATCC GTACCTGTGG TTGCGTGCGA TCAGCCAGTA CCGTGCGGAT
CTGACGGGCG CTCCGGATTT CGCATACCGG ATGTGCTGCC GGCGGATCTC CGACGAACAG
CTGGCGACGC TCGACCTGTC GTGCGTGCGG GTCGCCTATA ACGGCGCCGA GTCGGTGCGC
GCCAGCACCT TGACCGATTT TGCGCAGCGC TTCGCCGCCG CAGGCTTCGC TGCCGACGGT
TTTCTGCCGT GCTACGGGCT GGCGGAGGGA ACGCTGTACG TCGCCGGTCG CGCGAAGCAG
CATCCGATCC GGACGCTATG CGTCGACCAG GCTGCGCTCC AGCGGCAATC CGTGGTGGTG
CGCGGCGAAT TCCTGGGCGT GTCGCCGCAG CCGCTGGATC GTCCGGGCGA ACGGGTCCTG
GTCAGCGTGG GTCGCACTGA CGGCGAACAA CACGTGATCG TGCGCGACCT GGAAACGAAC
GAGCGTTGCG CCGATCGGAC CATCGGCGAA ATCTGCGTGG CCGGCCCGAG CGTCGCCGCC
GGCTACTGGC ATCTGGACGA GCAGACGCAT TCGACCTTCC AGCACAGTCT GGCGGGCCAT
CGGGATCAGG TGTTCATGCG CACCGGCGAT CTCGGCTTCA TTCTGGGCGA CGAGCTTTAC
GTCACCGGCC GGCTCAAGGA CATGGTGATC CTGGCCGGCC GCAACTACTA CTCGGAGGAC
ATCGAGTACG CGCTGATCGT CGGCGTGCCG GAACTCGTGC CGAACGGTTG CGCGGCCTTC
ATGGACGATC AGGTCGACGC GGAGCGCCTG ATCGTCGTGG CGGAAGTCGA GCGCACGCAG
CGCAAGGGCA ATCTCGACAG CTTCATCGAC GCGATTCGCC AGGCTATCTG GAACCGCCTC
GACATCGGCC CGAGCGCGAT CGTGCTGGTG TCGCCCGGTA GCGTGCCGAA AACGTCGAGC
GGCAAGGTGC GCCGCAGCAC GTGCCGCACG CAGCTGCACG ACGGCGCGCT GACGATCCTC
GCGCAGTGGG ACGTCGAGGG CGGTGTACAT ACGCCCGCGC CCGATCGCCG GCAGCCCGCA
CGCCCGACAG CTGTTGCCGA CCAGCCGGCG GCCAACGATC GCCGGCGTGA TGAAAGCGCC
ACCGTCGACG AACTGAACGA CTGGCTCAGG CACTACGCGC GCACGCGGAT CGATTCGCGA
ACCATGGACG AGCGTCGCAC CATTCCGCCG CACGTCGTGC TCGATTTCGG GAATCGGGGC
CTGCTCGGCA TGCCGATCGA CCGTTCGCAT GGCGGCCTCG GCCTCGGCCA GCGCGACATG
TTGCGCGTGT TTGCGCAGCT GGCCGCGATC GATTCGACGC TGGCTTTCTT TGTCGCGCTG
AACAACACGC TCGGGATCCT GCCGATCATG CAGCATGCGC AGCCACCATT GCGCGAGGAA
TTGCTGCCGA GCCTCGCGAG CGGTCGGATG CTCGCCGCAT TCGCGATCAC GGAGCCGGCC
GCGGGCTCGC ATGTGCGCGC GATTGCCTCC CGCGCACAGC GCACCGAGTC CGGCGACTGG
CTGGTCACGG GGAACAAGCG CTGGAGCGGC TCATCCGCAT GGGCGGGAAT CATCAACGTG
TTCGCGAGGC AGGCCGACGG CACCGGAATG GTCGGGTTGG CGGTGCGCCC CGGCACGCCA
GGCGTGCGGA TCGGTGCCGA GGAGCTGACG ATGGGCGTGC GCGGCATGAT CCAGAATTCG
CTCCATCTGG ATCGGGCACG AATCAGCGAC GCATACCGGC TCGGCGACAT CGGCCAGGGG
ATGCTCGTGG CGCAGCACGC GATGAACATC GCGCGCCTTG GCATCGCTGC CGTCTGCGTG
GGCGGAATGA AGCGCTGTGC GCAGCTGATG CATCGCTACG GAGCGCGGCG CCAGGTCGGC
ACAGGCCTCC TGCTGGACAA CCCGCTGAGC CGCCTGCGCC TGGGCGAGCT GCGTGACCGC
ATCGACGGGC TCGATGCGCT GGTCGAGCAC CTGGCCGCCG AACTGGACCT CGGCGTCGCG
GTGCCTGAAG ACTGTCTCCT GATTTCGAAG ATTCTCGGCT CCGAGCTGCT GTCGCAATCC
GCTGACGAGA TGATGCAGTT CCTGGGTGGC CGCGGTTATA TCGAGACCAA CCTGGCACCG
CAGATCTTCC GGGACGCGCG CCTGACCCGC ATCTTCGAGG GGCCGACCGA AACGCTGCTG
GTTCACCTGG GCAGTCGTCT GCTCAACGGG AGCGACGATT TGCTGCGCTA TCTGGAGCGT
GCGCTGAGCG CCGGTGCGCT GGCCAGGGAG CTGCGCGAAC TGGGCGCACA GCTGGCGCAA
GACGGGCTCG CCAATGCGTC GAAACTCGAC GGCACCGCGC ACGCTGCCGT GTGGGTCAAT
TATTGGCTCG GCACGATCGC GCAATGGGGA TTGCTGCTGG CGGTGACCGA ACGCGCGGCT
GCGCAGCAGC ACATCGGCGA CGGCACGCTG CGCTGGGCGC AGAGCCAGTA CGAACTCGCG
ATCGAGGCGG CGCAACGGCA GGTCGGCCTG CGATCTGCGT TGTCCACGAC AGGGGAACTG
AACGACTGGG CAGCGCGCAT CGGGTTCGAG ATCGGCTCGA TCGAGCAAAC GATCCCGGGC
GCAAGCCAAC TCGTCGATCC GTTGCTGGAC CCCAATGCCG ACGCGCGTTC GGTCTCCCGC
GCGCCCGACG CGCCAGCCGG CGAAGACGCC GGTTCGGCCG CAACCCCGAT CGTGAGTGAG
CCGGCAAGCC TGTTCGATCG CCAACAGATT CATGCCGTCG AACAATGGCT CATCGCGTGG
CTGGGCGAGC GCCTCAAGCA TCGCAAGCTT CGATTGACGC GCGAATCGAC GTTCGCCGAA
ATCGGCTTCG ACTCGATCCT CGCCGTCGAA ATGACGATCG TTTTCAGCGA GACGTTCAGC
GTGACGGTCG ATCCGTCCGC GGTCTGGGAC TACCCGTCCA TTCGTGCGCT GGCCGCCCAT
CTTGCGCCCC GGACTCACGG CGCCGCGCCG GCCGTTGCCG TAGCGCACGC CGATTCGGAT
GCAGCTTCAT CCATTGCAGC CCAACCTTCG ACCCTGTGA
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| Protein sequence | MGAGRRQAAA RCFHSSSDDI MTTATLPTTL SELLQNRAAT LGDKTAYVFL SGPPEQEQAE
SMTFAELDAR ARRVAALLQQ NAIDIGDRVL LLCRPGLDYV SAFMGCLYAG AIAVPVYPPR
NKQHMVRIAG IVENAGANTI LCSAEDHARC ATWLADTDAS GSTLLDVGGA QVLDPVPSPA
SVQPSRIAFL QYTSGTTGSP KGVMVSHGNL MHNLGLMREW LAYDEQSTIV SWLPPYHDMG
LIGVILTSLY GGFRSVLMAP ERFIQHPYLW LRAISQYRAD LTGAPDFAYR MCCRRISDEQ
LATLDLSCVR VAYNGAESVR ASTLTDFAQR FAAAGFAADG FLPCYGLAEG TLYVAGRAKQ
HPIRTLCVDQ AALQRQSVVV RGEFLGVSPQ PLDRPGERVL VSVGRTDGEQ HVIVRDLETN
ERCADRTIGE ICVAGPSVAA GYWHLDEQTH STFQHSLAGH RDQVFMRTGD LGFILGDELY
VTGRLKDMVI LAGRNYYSED IEYALIVGVP ELVPNGCAAF MDDQVDAERL IVVAEVERTQ
RKGNLDSFID AIRQAIWNRL DIGPSAIVLV SPGSVPKTSS GKVRRSTCRT QLHDGALTIL
AQWDVEGGVH TPAPDRRQPA RPTAVADQPA ANDRRRDESA TVDELNDWLR HYARTRIDSR
TMDERRTIPP HVVLDFGNRG LLGMPIDRSH GGLGLGQRDM LRVFAQLAAI DSTLAFFVAL
NNTLGILPIM QHAQPPLREE LLPSLASGRM LAAFAITEPA AGSHVRAIAS RAQRTESGDW
LVTGNKRWSG SSAWAGIINV FARQADGTGM VGLAVRPGTP GVRIGAEELT MGVRGMIQNS
LHLDRARISD AYRLGDIGQG MLVAQHAMNI ARLGIAAVCV GGMKRCAQLM HRYGARRQVG
TGLLLDNPLS RLRLGELRDR IDGLDALVEH LAAELDLGVA VPEDCLLISK ILGSELLSQS
ADEMMQFLGG RGYIETNLAP QIFRDARLTR IFEGPTETLL VHLGSRLLNG SDDLLRYLER
ALSAGALARE LRELGAQLAQ DGLANASKLD GTAHAAVWVN YWLGTIAQWG LLLAVTERAA
AQQHIGDGTL RWAQSQYELA IEAAQRQVGL RSALSTTGEL NDWAARIGFE IGSIEQTIPG
ASQLVDPLLD PNADARSVSR APDAPAGEDA GSAATPIVSE PASLFDRQQI HAVEQWLIAW
LGERLKHRKL RLTRESTFAE IGFDSILAVE MTIVFSETFS VTVDPSAVWD YPSIRALAAH
LAPRTHGAAP AVAVAHADSD AASSIAAQPS TL
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