| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5680 |
|---|
| Symbol | |
|---|
| ID | 4314570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 120304 |
|---|
| End bp | 121317 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638153522 |
|---|
| Product | tryptophanyl-tRNA synthetase II |
|---|
| Protein accession | YP_777561 |
|---|
| Protein GI | 115360424 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.882251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.353927 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACC CGACCCGTCC GACCATCCTC ACCGGCGACC GCACGACCGG CCCGCTGCAT
CTCGGCCACT ACATCGGCTC GCTGCGCGCG CGCGTGCAGA TGCAGCACGA GGCGACGCAG
TTCCTGCTGC TCGCCGACAC GCAGGCGCTG ACCGACAACA TGGGCCGCCG CCAGCGCGTC
ACCGAGAACG TGATCGAGGT CGCGCTCGAC TACCTGGCCG TCGGCATCGA CCCGGCGATC
TCGACGATCG TCGTCCAGTC GCAGGTGCCC GAGCTCGCCG AGCTGTCGCA ATACCTGCTG
AACCTCGTCA CGGTCGCGCG CCTCGAGCGC AACCCGACCA TCAAGGAAGA GATCCGCCTG
CGCGGCTTCG AGCGCGACAT CCCGGCCGGC TTCCTGACCT ACCCCGTCAG CCAGGCCGCC
GACATCACCG CGTTCAAGGC GACGCACGTG CCCGTCGGCG ACGACCAGTT GCCGATGATC
GAGCAAACCA ACGAACTCGT GCGCCGCTTC AACGCAACGG TCGACAAGCC GGTGCTGGTC
GAATGCGAGG CCGTGCTCTC GGCGGTCACG CGGCTGCCCG GCATCGACGG CAAGGCGAAG
ATGAGCAAGT CGCTCGGCAA CGCGATCACG CTCGGCTCGA CGCCCGACGA GATCGCGCAG
GCCGTGAAGG ACATGTACAC CGACCCGAAC CACCTGCGCG TCAGCGACCC CGGCCAGGTC
GAGGGCAACG TCGTGTTCAC GTTCCTCGAC GCATTCGAAC CCGACGTGTC GAAGGTCGAC
GAACTGAAGG CGCACTATCG CCGCGGCGGC CTCGGCGACA GCGTCGTGAA GCGCGTGCTG
AACGAGCGGC TGCAGGCGCT GATCGAGCCG ATCCGTGCGC GTCGCCGCGA ATTCGAGGCG
GACAAGGCCG AGGTGATGGC GATCCTGAAG CGCGGCACGC TGCATGCGCG CGAGGTGGCC
GGCGCGACGC TGGCGGAGGT GAAAGGCGCG ATGGGGCTCA CGTATTTCGA TTGA
|
|---|
| Protein sequence | MTHPTRPTIL TGDRTTGPLH LGHYIGSLRA RVQMQHEATQ FLLLADTQAL TDNMGRRQRV
TENVIEVALD YLAVGIDPAI STIVVQSQVP ELAELSQYLL NLVTVARLER NPTIKEEIRL
RGFERDIPAG FLTYPVSQAA DITAFKATHV PVGDDQLPMI EQTNELVRRF NATVDKPVLV
ECEAVLSAVT RLPGIDGKAK MSKSLGNAIT LGSTPDEIAQ AVKDMYTDPN HLRVSDPGQV
EGNVVFTFLD AFEPDVSKVD ELKAHYRRGG LGDSVVKRVL NERLQALIEP IRARRREFEA
DKAEVMAILK RGTLHAREVA GATLAEVKGA MGLTYFD
|
|---|
| |