| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5652 |
|---|
| Symbol | |
|---|
| ID | 4314542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 87220 |
|---|
| End bp | 87831 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638153494 |
|---|
| Product | histidinol-phosphate phosphatase family protein |
|---|
| Protein accession | YP_777533 |
|---|
| Protein GI | 115360396 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
|---|
| TIGRFAM ID | [TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.377439 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGA AGCGCGAACG GCGGCTGCCG GGCGCCGTGC TGCTCGACAA GGACGGCACG
CTGCTCGAGA ACGTGCCGTA CAACGTCGAT CCCGCGCGGA TGAAACTCGC GCCGGGCGCG
GCGCGCGCGC TGCGCACGCT CGGCGAGACC GGCATGCCGA TCGCGGTCGT GTCGAACCAG
CCGGGCGTCG CGCTCGGCCG CTTTACCGAA CGTGAGCTTG GCGCGGTCCG CCAGCGTCTC
GCCGAACTGT TCGAAGCGAA CGGCGCGGTG CTGGCGGACT TTTTTTACTG CCCGCATCAC
CCGGCGGGCA GCGTGCCGCG CTACACCTGC GACTGCATTT GCCGCAAGCC GCGCCCCGGC
ATGTTGCGCC GTGCGCTCGC GACGCTCGGC GCGGTCGCCG AATGGAGCTG GATGATCGGC
GACATCCTCG ATGACGTCGA GGCCGGCCGC GCCGCACGCT GCGGCACGAT CCTGGTCGAC
TGCGGCAACG AGACCGAATG GCGGATCGAC GCCACGCGCA CGCCGCTCCA CGTGGTCACC
CGTCTCGACC TCGCCGCCGA CATCGTCGTG CGCGAGGCCG TGCGCCGTCA CGGCTCGTGG
GTGCGGCGAT GA
|
|---|
| Protein sequence | MALKRERRLP GAVLLDKDGT LLENVPYNVD PARMKLAPGA ARALRTLGET GMPIAVVSNQ
PGVALGRFTE RELGAVRQRL AELFEANGAV LADFFYCPHH PAGSVPRYTC DCICRKPRPG
MLRRALATLG AVAEWSWMIG DILDDVEAGR AARCGTILVD CGNETEWRID ATRTPLHVVT
RLDLAADIVV REAVRRHGSW VRR
|
|---|
| |