| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5640 |
|---|
| Symbol | |
|---|
| ID | 4314507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 71960 |
|---|
| End bp | 73276 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638153482 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_777521 |
|---|
| Protein GI | 115360384 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.172665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGAA TTGCGTTGAT CAGTGAACAT GCGTCGCCGC TGGGGGTGAT CGGCGGCGTG
GATGCGGGCG GACAGAACAT CTACGTCGCG AACGTCGCGA AGCAACTGGC CGAGCGCGGC
CTCGACGTCG ATGTCTACAC GCGTTGCGAC AATGCGCACC TGCCCGAAGT CGTGGAGATC
GGCCCGCGCA TGCGCGTGAT CCACGTGCCG GCCGGCCCGC CGGTCGACGT GCCGAAGGAG
CGGCTGCTGC CGTACATGGG GGCATTCGCC GACTACATGA TCGCGCGCAT GCGGCGCGAA
GCCGATCCTG TCGACGTGAT GCACGCGAAC TTCTTCATGT CGGGCGAGGC CGCGCTGCGT
GTGAAGAAGC GCCTCGGCAT TCCGCTCGTC ACGACGTTCC ATGCGCTCGG GCGCGTGCGG
CGGTTGCATC AGGGCGCGGC CGACGGCTTT CCCGATGAAC GCTTCGCGAT CGAGGACACA
CTCGCGCGCC GCTCCGACCG GTTGATCGCC GAATGCCCGC AGGACGCGCT GGATCTGACG
ACCCACTATC ACGCGGACGC CGCGCGCATC GAGATCGTGC CGTGCGGGTT CGATGCGCGC
GAATTCCGGC CGGTGCCGCG CGCCGACGCG CGCGCGCAGC TCGGCTGGCC GCAGCACGCG
TTCGTCGTGC TGCAGCTCGG GCGGCTCGTG CCGCGCAAGG GGATCGACAC CGTGATCGAC
GCGCTGGCGC GCATGCCGCG CGACCCGCAG CGCCCGACGC GGCTCTATAT CGTCGGCGGA
AGCCACGCGA CGCCCGATCC GGCCCGCGAT CCGGAACTCG CGCGGCTCGC CGCACTCGCG
CACGACACCG GCATCGCGGA GCGTGTGATC TTCGTCGGCC GGCGCGAGCG CGACGTGCTG
CACCTGTACT ACAGCGCGGC CGACGTGTTC GTGACGACGC CGTGGTACGA GCCGTTCGGC
ATCACGCCGG TCGAGGCGAT GGCCTGCGCG GCGCCGGTGA TCGGCAGCGA CGTCGGCGGC
ATCCGCACCA CGGTGGACGA CGGCGTGACC GGCTACCTGG TGCCGCCGCG CGATCCGGCC
GCGCTCGCCC AGCGGCTCGT GCAACTGCGC GCGCGCCCCG ACCTGTGCGA CGCGCTCGGC
CGCGCCGGCT ATCTGCGCGC GCACCGCTTC TATACGTGGC GCGGCGTGGC CGATCGCCTC
GTCGACATCT ACCGCGACGT CGCGCATCCG CAGCGCGCCG GCACCGCGGC CAGCAGCCGG
CGCACCCCCG TCGCCGCCAC GCCGGCCGTA CTCGCGAACC GCAAGGAGAA TGCATGA
|
|---|
| Protein sequence | MQRIALISEH ASPLGVIGGV DAGGQNIYVA NVAKQLAERG LDVDVYTRCD NAHLPEVVEI
GPRMRVIHVP AGPPVDVPKE RLLPYMGAFA DYMIARMRRE ADPVDVMHAN FFMSGEAALR
VKKRLGIPLV TTFHALGRVR RLHQGAADGF PDERFAIEDT LARRSDRLIA ECPQDALDLT
THYHADAARI EIVPCGFDAR EFRPVPRADA RAQLGWPQHA FVVLQLGRLV PRKGIDTVID
ALARMPRDPQ RPTRLYIVGG SHATPDPARD PELARLAALA HDTGIAERVI FVGRRERDVL
HLYYSAADVF VTTPWYEPFG ITPVEAMACA APVIGSDVGG IRTTVDDGVT GYLVPPRDPA
ALAQRLVQLR ARPDLCDALG RAGYLRAHRF YTWRGVADRL VDIYRDVAHP QRAGTAASSR
RTPVAATPAV LANRKENA
|
|---|
| |