Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5635 |
Symbol | |
ID | 4314502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 68269 |
End bp | 69126 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638153477 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_777516 |
Protein GI | 115360379 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0246755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0427159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG CAAAGACCCC GCCGCCCCAG AAGCAGACGC AGCAGCCGGG CAGCGAGCGG GACATGCATC CGAAGCCGCG CGACGAAGCG GCCGATTACG TCGGCAGCGG CAAGCTGGCC GGCAAGGTCG CGCTCGTGAC CGGCGGCGAC AGCGGCATCG GCCGCGCGGT CGCGATCGGT TTCGCGAAGG AGGGCGCGGA CGTCGCGATC GTCTACCTGA ACGAATCGGA CGATGCCGCG CATACCAAGC AACTGATCGA GCAGGCGGGC CGGCGCTGCG AGGCGATCGC CTGCGACATC GGCGAGCGCC GCCAGGCGCG CGACGCCGTG GCGCGCACCG TCGAAAAGCT CGGCCGGCTC GACGTGCTCG TGAACAACGC GGGCGAACAG CATCCGCAAC CCGGTATCGA GGACGTGACG GAGGAACAGC TCGAGCGCAC GTTCCGCACC AACGTGTACG GGATGATCTT CTGCACGCAG GCGGCGCTTC AGCACATGAA GCCCGGTGGA CGCATCGTCA ACACCGCGTC GGTCACCGCG TATCACGGCA GCCCGAAGCT GCTCGACTAC TCGGCGACCA AGGGCGCGAT CGTCGCGTTC ACGCGTTCGC TATCGATCGA ATTGGCCGAG CGCGACATTC GCGTGAACGC CGTCGCGCCG GGGCCGATCT GGACGCCGCT GATCCCGTCG ACCTTCAGCG CCGACGAAGT CGCGAAGTTC GGCTCGAACG TGCCGCTGAA GCGGCCGGGG CAGCCCGACG AGCTGATCGG CTGCTACGTG CTGCTCGCAT CGGAAGGCGC GAGCTACATG ACCGGACAGA CATTGCATCC GAACGGCGGC TCGATCGTCG GCGGCTGA
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Protein sequence | MTTAKTPPPQ KQTQQPGSER DMHPKPRDEA ADYVGSGKLA GKVALVTGGD SGIGRAVAIG FAKEGADVAI VYLNESDDAA HTKQLIEQAG RRCEAIACDI GERRQARDAV ARTVEKLGRL DVLVNNAGEQ HPQPGIEDVT EEQLERTFRT NVYGMIFCTQ AALQHMKPGG RIVNTASVTA YHGSPKLLDY SATKGAIVAF TRSLSIELAE RDIRVNAVAP GPIWTPLIPS TFSADEVAKF GSNVPLKRPG QPDELIGCYV LLASEGASYM TGQTLHPNGG SIVGG
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