Gene Bamb_5622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5622 
Symbol 
ID4314489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp55886 
End bp56368 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID638153464 
ProductPRC-barrel domain-containing protein 
Protein accessionYP_777503 
Protein GI115360366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.100635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACTC CCGATCAAGG ACGGACCCGC ATCATCGGCA AGGGCGCCGC GACGGCGGAG 
GGCCCCGGCC CGGACGTGAT GGCGGCCGAC ACGCTGGAAG GCGACAAGGT CTATACGACC
GATGGCGACG ACGTCGGCAA GATCAAGGAC ATCATGCTCG ACGTGCGCTC GGGCCGCATC
GCGTATGCGG TGCTCTCGAG CGGCGGCCTG CTCGGCATCG GCGACAAGCT GCTCGCGATT
CCATGGAGCG CGCTGACGCT CGATACCGAA CGCAAATGCT TCCTGCTGTC GGTGTCGTCA
GAGCGGATCA AGAACGCACC GGGCTTCGAC AAGGATCACT GGCCGGCGAT GGCCGACCCG
CAATGGGCCG GGCCGCTGCA CGAGTACTAC GGCAGCACGC CGTACTGGAG CGCCGGCGAT
GAGCTCGGGC TGACCGATCC GACCGAAGAC CTCAACGATC CGCGTACGCG CGGCACGCAT
TAA
 
Protein sequence
MQTPDQGRTR IIGKGAATAE GPGPDVMAAD TLEGDKVYTT DGDDVGKIKD IMLDVRSGRI 
AYAVLSSGGL LGIGDKLLAI PWSALTLDTE RKCFLLSVSS ERIKNAPGFD KDHWPAMADP
QWAGPLHEYY GSTPYWSAGD ELGLTDPTED LNDPRTRGTH