Gene Bamb_5559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5559 
Symbol 
ID4314448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2634368 
End bp2634709 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content67% 
IMG OID638153401 
Productpeptidylprolyl isomerase 
Protein accessionYP_777440 
Protein GI115360302 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCA CCACGACCGC ATCGGGCCTC AAAATCGAAG AGCTGACCGA AGGCACCGGC 
GCGGAAGCGC AAGCCGGCCA GACCGTCAGC GTCCACTACA CGGGCTGGCT GACCGACGGT
CAGAAATTCG ACTCGAGCAA GGACCGCAAC GACCCGTTCG CGTTCGTGCT CGGCGGCGGC
ATGGTCATCA AGGGCTGGGA CGAAGGCGTG CAGGGCATGA AGGTCGGCGG CGTGCGTCGC
CTGACGATCC CGCCGCAACT CGCGTACGGC CCGCGCGGCG CAGGCGGCGT GATCCCGCCG
AACGCGACGC TCGTGTTCGA AGTCGAGCTG CTCGACGTCT GA
 
Protein sequence
MSVTTTASGL KIEELTEGTG AEAQAGQTVS VHYTGWLTDG QKFDSSKDRN DPFAFVLGGG 
MVIKGWDEGV QGMKVGGVRR LTIPPQLAYG PRGAGGVIPP NATLVFEVEL LDV