Gene Bamb_5541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5541 
Symbol 
ID4314430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2611776 
End bp2612198 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID638153383 
Productrubrerythrin 
Protein accessionYP_777422 
Protein GI115360284 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.334628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAC TCAAGGGCAG CAAAACCGAA GAGAACCTGA AGGCCGCATT CGCGGGCGAA 
TCGCAAGCGA ACCGGCGCTA TCTGTATTTC GCTTCGAAGG CTGACGTCGA AGGCCAGAAC
GACATCGCCG CGCTGTTCCG CTCGACCGCC GAAGGCGAAA CCGGCCATGC GCACGGCCAC
CTCGAATATC TCGAAGCAGT CGGCGATCCC GCGACGGGTT TGCCGTTCGG CTCGTCGCGG
CTGAACCTCG AATCGGCGAT CGCCGGCGAG ACGCACGAAT ACACCGACAT GTATCCGGGC
ATGGCGAAGG CGGCACGCGA AGAAGGCTTC GACGAAATCG CGAACTGGTT CGAGACGCTC
GCGAAGGCCG AACGCAGCCA CGCGAACCGC TATACGAAGG CGCTGGACGC ACTCGTCGAC
TGA
 
Protein sequence
MAQLKGSKTE ENLKAAFAGE SQANRRYLYF ASKADVEGQN DIAALFRSTA EGETGHAHGH 
LEYLEAVGDP ATGLPFGSSR LNLESAIAGE THEYTDMYPG MAKAAREEGF DEIANWFETL
AKAERSHANR YTKALDALVD