| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5410 |
|---|
| Symbol | |
|---|
| ID | 4314299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2457454 |
|---|
| End bp | 2457852 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638153251 |
|---|
| Product | carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_777291 |
|---|
| Protein GI | 115360153 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0441836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC AGGACAGGGA ACAGGGCAAG GCACGCCGCG CCGAAGTCAT GGGCGACGCA
TTCGTCGAGC GCGCGATGCG CGACCTCGAC GGATTTTCGC GTCCGCTGCA GAACTGGCTG
AACGAGCACG CATGGGGCAG CACCTGGCAG CGCGACGGCA TCGACCTGAA GACGCGCAGC
CTCTGCACGT GCGCGATGCT GGCGGCGCTG GGCCGCAGCA CGGAGCTGAA GGGCCACGTG
CGCGGCGCGC TCAACAACGG CGCGAGTCTC GTCGAGATCC GCGAGGTGCT GCTGCACAGC
GCGCTGTACG CGGGTGCGCC GGCCGCGGTC GAAGCGTTCC GCAGCGCACG CGAGGTGATC
GCGGAACTCG GGCTGTCGCT GCCCGACGAC GAAGCGTGA
|
|---|
| Protein sequence | MSEQDREQGK ARRAEVMGDA FVERAMRDLD GFSRPLQNWL NEHAWGSTWQ RDGIDLKTRS
LCTCAMLAAL GRSTELKGHV RGALNNGASL VEIREVLLHS ALYAGAPAAV EAFRSAREVI
AELGLSLPDD EA
|
|---|
| |