| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5405 |
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| Symbol | |
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| ID | 4314294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2452050 |
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| End bp | 2453102 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638153246 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_777286 |
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| Protein GI | 115360148 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.606639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTTG TCTACCGCTA CCGGGTGAAG TCGCTCAACG GACTGCTCAA CAAGCAGAGC
CGTGCGGTGA ACTACGTCTG GAACTTCTGC AACGATACGC AGAAGCACGC GCTGAAATGG
AGCAAGAAGT GGCCAACAGG CTTCGACCTG AATGGACTGA CGAGCGGCAG CAGCAAGGCG
CTTGGCATTC ACTCCGGCAC GATCAACGCG ACGTGCGAGC AATACGCGAA GTCGCGCAGC
CAGCACCGTC GGCCTTACCT GCGCTATCGC GGCAGGAAGT CGCTTGGCTG GGTGCCACTG
AAGGGCTGTC ACCTGAAGCG CGAGGGTGAT GCGTTCCGAT TCGCCGGCAA TACCTTTCGC
GTGTTCAGTA GCCGGCCGCT TCCCGAAGGC AAGATCAAGG ATGGGACCAA CTTCGCACAG
GATGCGCGCG GCAACTGGTT TCTCAACATC GTGATCGAGA TGCCCGATAT GCAGGCCCGC
CCGGTCCGTT CCGGTGTTGG CATCGATCTC GGCCTGAAAG ACTTCGCCAC ACTTTCGACC
GGCGAGAAGC TGCCCAATGA CCGATTCGGC CGACGCGCGG CGGAGAAACT GGCGAAAGCT
CAACGGGCGC GCAAGCACAA GCGACATATC GCGAAGCTGC ACGCCAAAGT GGCGAATGCC
CGTGCCGATT TCCAGCACAA GCTCGCGCTC GATCTGGTGC GGCGTTTCGA TTACATCGCG
GTCGGCAACG TGTCGGCCGC GAAGCTCGCC AGAACCAGGA TGGCGAAGAG CGTCTACGAC
GCATCCTGGT CGTCCTTCCG AAGCAAGCTC CGCTACAAGG CGATCGCGCA CGGGGCCACG
TTCGAGGAAG TCGACGAAAG CGGTTCTACC CAGTCCTGTT CGGCGTGCGG GTCGAAAGAC
AGCACGACGC GGCCGAAAGG TATCGCCGGA CTGCGAATAA GAGAGTGGGC CTGCAGTGAA
TGTGGTGTCG AGCATGATCG AGATACCAAC GCTGCGCTGA ACATTCTCCG ATGCGGACGT
GCATCGCCAG GTGTGGGAAT CACCTGCCTT TAG
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| Protein sequence | MILVYRYRVK SLNGLLNKQS RAVNYVWNFC NDTQKHALKW SKKWPTGFDL NGLTSGSSKA
LGIHSGTINA TCEQYAKSRS QHRRPYLRYR GRKSLGWVPL KGCHLKREGD AFRFAGNTFR
VFSSRPLPEG KIKDGTNFAQ DARGNWFLNI VIEMPDMQAR PVRSGVGIDL GLKDFATLST
GEKLPNDRFG RRAAEKLAKA QRARKHKRHI AKLHAKVANA RADFQHKLAL DLVRRFDYIA
VGNVSAAKLA RTRMAKSVYD ASWSSFRSKL RYKAIAHGAT FEEVDESGST QSCSACGSKD
STTRPKGIAG LRIREWACSE CGVEHDRDTN AALNILRCGR ASPGVGITCL
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