Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5356 |
Symbol | |
ID | 4314245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2397205 |
End bp | 2398125 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638153197 |
Product | LysR family transcriptional regulator |
Protein accession | YP_777237 |
Protein GI | 115360099 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.556999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCGG TCGATCACCT CGATCTGAAC CTGTTGCGGG TGTTCCAGGC GATCGTCGAG GAGCGCAGCC TGACCAAGGC CGGCGAGCGG CTCGCATTGT CGCAGCCGGC CGTCAGCTAT TCGCTCGGGC GGCTGCGCAC GCTGTTCGAC GATCCGCTGT TCGTGCGCAC GCGCGCGGGG ATGCAGCCCA CGCCGGTCGC GCTCGAACTC GCGGGGATCG TCGGCAAGGC GCTCGACATG GTGCGCGCCG CGCTGCGCTA TGCGGAGCGT TTCGATCCGG CATCGAGCAC GCGCACGTTC CGGCTGTCGC TGTCGGACGC GGGCGAGATG GCGTACCTGC CGGCGATCTG CCAGGCGCTG CGCGAGCGCG CGCCGCGCGT GACGCTGAGC GTGCAGCCGC TGCCGGTGGA GGAGATCGAG GAGGCGCTGC GCGCGAGCCG GCTGGACTTC GCGATCGGCA ACCTGCCGGA GCTGATGCCG CGCACGCGCC ACCAGGTGCT GTTCGAGGAA ACCTACGTGT GCATGACGGG CCGCCGGCGC GGGTTGCCGG CCGGCGCGGC GCTGAGCCTC GAGCAGTTCG TGCGCGCCGC GCACGTCAAC GTGAAATCGG TCGAGCACAG CCACCACGCG CTCGACGACG CATTGCGCGC GCAGGGCGTG GGCCGCAACA TCGCGCTCGA AGTGCCGCAC TTCGTCGCGC TGCCGAGCGT GCTGTCGGTC ACCGATCTCT ATGCGACGCT GCCGAGGCGG CTCGCGCGGA TCCTGAACCG CGGCAACGCG TTCCGGCTGT ACGACCTGCC GGTGACGTTG CCGCCCGCGC CGGTCACGAT GCACTGGCAC GAGCACTTTC ACGAGGACGA GGGCATCGCG TGGATGCGCG CGCTGCTTGC GGAGATCGTC GAGCATTTCG ACGAGGCGTG A
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Protein sequence | MTSVDHLDLN LLRVFQAIVE ERSLTKAGER LALSQPAVSY SLGRLRTLFD DPLFVRTRAG MQPTPVALEL AGIVGKALDM VRAALRYAER FDPASSTRTF RLSLSDAGEM AYLPAICQAL RERAPRVTLS VQPLPVEEIE EALRASRLDF AIGNLPELMP RTRHQVLFEE TYVCMTGRRR GLPAGAALSL EQFVRAAHVN VKSVEHSHHA LDDALRAQGV GRNIALEVPH FVALPSVLSV TDLYATLPRR LARILNRGNA FRLYDLPVTL PPAPVTMHWH EHFHEDEGIA WMRALLAEIV EHFDEA
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