| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5330 |
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| Symbol | |
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| ID | 4314219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2372175 |
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| End bp | 2372822 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153171 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_777211 |
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| Protein GI | 115360073 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.858277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGGA TAATTCTGGC TGACGATCAC GCAGTCATGC GGGACGGACT GCGTCACATC
CTGGAAACGG CCGGCGGTTT CGAGATCGTC GGCGAGGCGA GCGACGGCAC GGCCGCACTC
GCGCTGGCCG AGCGTGGCGA CGCCGACGTG CTGCTGCTCG ACCTGTCGAT GCCCGGGCCG
ACCGGCATCG AGCTGATCCG GCTCGTCAAG ACGCGCGCGC CGGCGCTGCG CATGCTGGTG
CTGACGATGC ATGCGGAGGC GCAGTACGCC GCGCGCGCGT TCAAGGCCGG CGCGACCGGC
TACCTCACGA AGGACAGCGC GACCGCCGAG CTCGTCCAGG CCGTCACGAA GGTCGCGGCG
GGCGGCGTCT ACGTGAGCCC GCAGGCGGCC GAAAGCCTCG CGCGCACGCT GCGCGCGCCC
GTCGAAATGC TGCCGCACGA ACGGTTGTCC GCGCGCGAAC TCGACGTGAT GCGCCGCATC
GTCGCGGGCC AGACGGTCAC GCGGATCGCG TCGGAACTCA CGCTGAGCAC GAAGACGGTC
AGCACCTACA AGACGCGCAT CCTCGAGAAG ATGGAGCTGC CGCACGAAGC CGCGCTGGTG
CGCTACGCGG TGCGCCACGA TCTCGACCTC GGCGTCGACG ACGCATGA
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| Protein sequence | MIRIILADDH AVMRDGLRHI LETAGGFEIV GEASDGTAAL ALAERGDADV LLLDLSMPGP
TGIELIRLVK TRAPALRMLV LTMHAEAQYA ARAFKAGATG YLTKDSATAE LVQAVTKVAA
GGVYVSPQAA ESLARTLRAP VEMLPHERLS ARELDVMRRI VAGQTVTRIA SELTLSTKTV
STYKTRILEK MELPHEAALV RYAVRHDLDL GVDDA
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