Gene Bamb_5305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5305 
Symbol 
ID4314194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2344807 
End bp2345721 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content69% 
IMG OID638153146 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_777186 
Protein GI115360048 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC ATCACGAAGT GATCGTGATC GGCGGCAGCT TTGCCGGGCT GTCGGCCGCG 
ATGCAACTGG CGCGCGCGCG ACGCCGCGTG CTCGTGATCG ATGCCGGGCG GCCGCGTAAT
CGTTTCGCGG AGCATGCGCA CGGCTTTTTC GGGCAGGACG GCAAGCCGCC CGCGCGGATC
GTCGCCGACG CCGCCGCGCA ACTCGCGGCC TATCCGACCG TGCAGCGGAT CGCCGGCGAA
GCGCGCACCG CCGAACGCGA TGCGCGCGGC CGCTTTCACG TGACGCTGGC AGACGGCAGC
CGCGCCAGCG CCGACCGGCT GATCCTCGCG ACCGGCATCC GCGACGCGTT GCCCGCGCTG
CCGGGTCTTG CGGAGCGCTG GGGTGTCAGC GTGCTGCATT GTCCGTATTG CCATGGGTAC
GAGGTGTCGG ATCGGCAACT CGGCGTGCTG GCCACGCATC CGCTGTCCGT GCATCAGGCG
ATCCTGATTC CGGACTGGGG GCCAACGACG TGGTTCACGC AAGGCCTGGT CGAACCGAAT
GAAGAGGAAG CCGCGTTGCT GGACGCACGT GGCGTGCGTA TCGAGCGGTC GCCGGTCGTC
GAGATCCTCG GCGACGCACC GCGTATCGAA GCGTTACGGC TCGCCGACGG GCAGGTCGTG
CCGATCGATG CGCTGTTCAT CGGCGCGCGT ACGGAGATGG CGAGCGATCT CGCGCAACAG
CTCGGCTGTG CGTTCGACGA AGGGCCGCTC GGCGTGGCAG TCCGCGTCGA GACGTGGAAG
CAGACGAGCG TTCCCGGCGT GTTCGCGGCC GGCGATGCGT CGAGCCTGAT GACGAATGCG
ACGTTCGCGT CGGCATCGGG CGTCGCAGCC GGCGTGGGCG CGCATCGTTC GTTGATTTTC
GGGCTGGACG CGTGA
 
Protein sequence
MQNHHEVIVI GGSFAGLSAA MQLARARRRV LVIDAGRPRN RFAEHAHGFF GQDGKPPARI 
VADAAAQLAA YPTVQRIAGE ARTAERDARG RFHVTLADGS RASADRLILA TGIRDALPAL
PGLAERWGVS VLHCPYCHGY EVSDRQLGVL ATHPLSVHQA ILIPDWGPTT WFTQGLVEPN
EEEAALLDAR GVRIERSPVV EILGDAPRIE ALRLADGQVV PIDALFIGAR TEMASDLAQQ
LGCAFDEGPL GVAVRVETWK QTSVPGVFAA GDASSLMTNA TFASASGVAA GVGAHRSLIF
GLDA