Gene Bamb_5286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5286 
Symbol 
ID4314175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2328362 
End bp2329225 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID638153127 
Productenoyl-CoA hydratase 
Protein accessionYP_777167 
Protein GI115360029 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.606147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCC AATCTCATCC GGCGTGCCGT CCGTTTTACG AAGCAGGTGA ACTCACGCAA 
CTCACCGCGT TCTACGAAGA AGGCCGCAAC ATCATGTGGA TGATGCTGCG ATCGGAGCCG
CGACCGTGCT TCAACCAGCA ACTCGTCACC GACATCATCC ATCTCGCGCG CGTCGCACGC
GACTCCGGCC TGCCGTTCGA CTTCTGGGTG ACGGGTTCGC TCGTGCCCGA GCTGTTCAAC
GTCGGCGGCG ACCTGAGCTT CTTCGTCGAC GCGATCCGCA GCGGCCGCCG CGATCAGTTG
ATGGCCTATG CCCGCTCGTG CATCGATGGC GTGTACGAGA TCTACACGGG CTTCGGCACC
GGTGCGATCT CGATCGCGAT GATCGAGGGC AGCGCGCTGG GCGGCGGCTT CGAGGCCGCC
CTCGCGCACC ACTACATGCT TGCGCAGAAG GGTGCGAAGC TCGGCTTTCC CGAGATCGCG
TTCAACCTGT TCCCGGGCAT GGGCGGCTAT TCGCTGGTCG CGCGCAAGGC GGACCGCGGG
CTCGCGGAAT CGCTGATCTC GTCCGGCGAG GCGCATGCGG CCGAGTGGTA CGAGGATCGC
GGGCTGGTCG ATCAGACGTT CGACGCGGGC GACGCGTATC TCGCGACGCG CACCTTCATC
GACGTGACGA AGCCGAAGCT GAACGGCATC CGCGCGATGC TGCGCGCACG CGACCGCGTA
TTCCAGATCA CGCGTTCCGA GCTGATGGAC ATCACCGAGG AATGGGTTCA CGCGGCGTTC
ACGATCGAGC CGAAGGATCT CGCGTACATG GAACGTCTGG TGATGCTGCA GAACCGGCGC
GTGTCGAAGC TGCGCACGGT GTGA
 
Protein sequence
MQLQSHPACR PFYEAGELTQ LTAFYEEGRN IMWMMLRSEP RPCFNQQLVT DIIHLARVAR 
DSGLPFDFWV TGSLVPELFN VGGDLSFFVD AIRSGRRDQL MAYARSCIDG VYEIYTGFGT
GAISIAMIEG SALGGGFEAA LAHHYMLAQK GAKLGFPEIA FNLFPGMGGY SLVARKADRG
LAESLISSGE AHAAEWYEDR GLVDQTFDAG DAYLATRTFI DVTKPKLNGI RAMLRARDRV
FQITRSELMD ITEEWVHAAF TIEPKDLAYM ERLVMLQNRR VSKLRTV