| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5152 |
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| Symbol | |
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| ID | 4314043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2182919 |
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| End bp | 2183578 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638152995 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_777035 |
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| Protein GI | 115359897 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.535465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAAT TTTTTGTGCG AGTGATGGTA GCGGACGATC ATCCTTCGTC CGCACTCGGG
ATGTCGCAGG CACTCGCGGG CAGCAGCACG ATCAAGCTGC TCGGCACCGT GTCGAATTCG
ACCGACCTGG TGGCGATGCT CGACGTGCAG CAGAGCGACG TGCTCGTCGT CGATTATGTG
ATGCCGGGCG GCAAGTATGG CGACGGTCTT GCGTTGTTGT CGTTTTTGCA GCGTCGCTAT
CCCGCGCTTC ATCTCGTGAC GATCACGATG ATCGACAATC CGAGCGTGCT GCATGCGATT
CAGCGGCAGG GCGTCGGGTG CATCCTCAGC AAGTCCGACG CGATTTCGCA TCTGGTCGGC
GCGGTTCACG CGGCTTATGT CGGTGCGAAT TATCTGTCGC CGTTCGTCAA GCAATTGCTG
GAAGGCACCG AGACGTCGCC GGGCACGCGC ACGCTGACGG CCCGCGAAAT CGAGGTCGTG
CGACTTTACG GCGCCGGTCT GACGGTTGGC GAGATCGCCG TCCAGCTTCA CCGGAGCAAG
CAGACGATCA GCTCGCAGAA GTCGAGCGCG ATGAAGAAGC TCGGCATCGT CCGCGACGCG
GACCTGATCC GCTATGCGAG CGAGGGCCAA CTGCCCGAAA TGCCCGGGAC CGATGCGTAG
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| Protein sequence | MDEFFVRVMV ADDHPSSALG MSQALAGSST IKLLGTVSNS TDLVAMLDVQ QSDVLVVDYV
MPGGKYGDGL ALLSFLQRRY PALHLVTITM IDNPSVLHAI QRQGVGCILS KSDAISHLVG
AVHAAYVGAN YLSPFVKQLL EGTETSPGTR TLTAREIEVV RLYGAGLTVG EIAVQLHRSK
QTISSQKSSA MKKLGIVRDA DLIRYASEGQ LPEMPGTDA
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