Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5128 |
Symbol | |
ID | 4314019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2160235 |
End bp | 2161122 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638152971 |
Product | LysR family transcriptional regulator |
Protein accession | YP_777011 |
Protein GI | 115359873 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.467029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTCG ATAACCTCGC GCTGTTCCTG CGCATCGTGG AAAAGGGTGG GCTCGCCGCG GCCGGCCGCG AGGTCGGCCT GTCGCCGGCC ACGGTCTCCG AGCGGCTGGC GGCGCTCGAG AGCCATTACG GCGCGGCGCT GCTCACGCGC ACGACGCGCG CGATCAGCCT GACCGACGAG GGCCGCACGC TGGTCGCCGG CGCGCGGCGC CTGCTTGCCG AAGCGGATGA ACTCGAAAGC CGCGTGCGGC TCGGTGCGCA GACGCTGTCG GGGCCCGTGC GGCTCAGCGC GCCGGCCGAC CTCGGGCAGG CGCGCGTCGT GCCCGTCGTC GACGCGTTCC TGGCCGAGCA TCCGGGCGTC ACGGTCGACC TGCATCTCGG CGACGGCTAC GTCGATCTCG TCGGGCAGGG GCTCGATTTC GCGATCCGGC GCGGCACGCT CGCGGACAGC GCGCTGCGCA GCCGCTCGCT CGGCCGGTCG CGCCGCGTGG TGTGCGCCGC GCCCGCCTGT CTCGCCGCGC ACGGCACGCC GCGGCATCCG GACGAACTCG CCGCGCACGA CTGCATCGTG ATGCGTTTCG GGCAGGAGCT GTATGCCGAG TGGCCGTTCC GCATCGACGA CGCACTGAAG CGCGTGATGG TGCGCGGCCG GCGCGTGGCC AACGACGGAG CGCTCGTGCG CGCGTGGTGC GTCGCGGGGC ACGGGATCGC GCTGAAGTCG CTGCTCGACG TCGAGCAGGA TCTGGCGTCC GGCGCGCTCG TCGAGATCCT GCGCGACTTC TCGCCGGGCG AAGTCGACCT GCAGATCGTT TATCCGGGCG GCGCCGCGCA GCCGCGGCGC GTGCGCGCGC TGATCGAGCA GCTCGCGCAG GCGCTGGCAG CGGGATGA
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Protein sequence | MLLDNLALFL RIVEKGGLAA AGREVGLSPA TVSERLAALE SHYGAALLTR TTRAISLTDE GRTLVAGARR LLAEADELES RVRLGAQTLS GPVRLSAPAD LGQARVVPVV DAFLAEHPGV TVDLHLGDGY VDLVGQGLDF AIRRGTLADS ALRSRSLGRS RRVVCAAPAC LAAHGTPRHP DELAAHDCIV MRFGQELYAE WPFRIDDALK RVMVRGRRVA NDGALVRAWC VAGHGIALKS LLDVEQDLAS GALVEILRDF SPGEVDLQIV YPGGAAQPRR VRALIEQLAQ ALAAG
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