Gene Bamb_5114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5114 
Symbol 
ID4314005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2143569 
End bp2144663 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content67% 
IMG OID638152957 
Producthypothetical protein 
Protein accessionYP_776997 
Protein GI115359859 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00719605 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAGC CTGACGTTTA TCTGTTGCAC GCGTACAGCT CGCGAAACAG CGGCGACGGC 
CTCCTGGTCA AGTTGAGCCT GAAGGCGATC CGCGCCGCCG GCATCGACGG CGTCGTCACG
ATCGTCTGCC TCGATCCCGA ATCGTTCCGC GGCTATCTCG ACGACGCGAA CATCCGTCTC
TGGTCGCTGG CCCGTTTCTG CATCGAATCG GTGCGCCGCT TCGGCCGCGC GAAGCCGGCG
CTGTTCTTCG GCGTGGGCGG CGGTTACCTG CGTGCGTCCA GCGGCATGGA AGGCTGGAAA
TCGCTTATCG CGCACGGCAG CCAGCTGGCC TGCACCACGT TGCGGCGCTC GAAGCGATCG
ATCTATCTGC CGCAGAGCAT CGGTCCGCTG AAGTCGCTGC CGGGCACCCT GCTGGCGGCG
TTGGTCCGGC GTTGCGTGGA CGTCGTGTTC CTGCGCGACG ACCAGAGCGT CGACGAGCTT
GCACACCCGC ACGGCATTCG CACGGGGGAT CTGGTCGTGC TCGAGATCGG CCGGACACCG
CGCAGCCAGC CGGACGCGGA GCACCGTGCC GAACACCCGC GCCCGATCCG GTTCGTGTTC
CGCGACCTGA AGGGCAAACC GTATCGCGAC GACTACGTCA GCCGTCTGCG TTGCGTCGCG
AAGCGGCTGC CGCGCGCGGG GTTCGCGCTG CAAAGCAGTG GCCGCGGCAA CGGCGACGAC
ACGTTCTATC GCGACACGTT CGGCGTCGGG CAGGTCGACG ATCTGGCGAC GCTCGTCGCG
CGCGAGCGCC CGGTGGTCGT CTCCGTCCGG CTGCACGGCA GCCTCGAAAG CGTGCTGGCC
GGCGTGCCGA GCATTCACAT CGCGTACGAG CGCAAAGGTC ACGCCGCGTA CGACGACCTC
GGCCTGTCGC GCTACGTGGT GCACGCCAGC GACTTCGGCG CGGACCGCGT CGCCGCGCTC
GCTCGCGAGC TTGCGCACGA CGACAGCGCG TACTGGCAGG CGCTGCGCAC GGCAGACGCG
ACGCGCTACA ACGAGATGGT CGAAAGGATC CGTCATGAAA TCGAGCAGTT CAATCACCTT
CGTGATGGAC GGTAA
 
Protein sequence
MNKPDVYLLH AYSSRNSGDG LLVKLSLKAI RAAGIDGVVT IVCLDPESFR GYLDDANIRL 
WSLARFCIES VRRFGRAKPA LFFGVGGGYL RASSGMEGWK SLIAHGSQLA CTTLRRSKRS
IYLPQSIGPL KSLPGTLLAA LVRRCVDVVF LRDDQSVDEL AHPHGIRTGD LVVLEIGRTP
RSQPDAEHRA EHPRPIRFVF RDLKGKPYRD DYVSRLRCVA KRLPRAGFAL QSSGRGNGDD
TFYRDTFGVG QVDDLATLVA RERPVVVSVR LHGSLESVLA GVPSIHIAYE RKGHAAYDDL
GLSRYVVHAS DFGADRVAAL ARELAHDDSA YWQALRTADA TRYNEMVERI RHEIEQFNHL
RDGR