Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5107 |
Symbol | |
ID | 4313998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2135200 |
End bp | 2136237 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638152950 |
Product | peptidase M23B |
Protein accession | YP_776990 |
Protein GI | 115359852 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000871581 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00235334 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGTGCCG GTGCATGTGC GCCGTACATC GTCCTCTGCG ATGCGGCGCG CGATGCGATC GAGCGCGATT ACGCGGCGCG CTTCGCGTAC GGTTTTGCGT CGCCGCTTCC GGCAATCGGC GCTGCGCCGG CGTTCGACGC GCGTCCTGTC GATCTCGCGT CCGCCGAGCC GTTCATGCTC GCGGAGCAGG AGCACGGCAC GCGAGCCGGC GCGATCACCG GCAGCCTGCG CGCGTCGCTC GCGCGCGCCG ATCTACCCGC CGACGTCGCC GCGCAGATCA CGCGCATGCT GGCCGGGCGG ATCGATTCGG CGCAGCGCGG CGCGATGGGC GATACCTTCC GCGTCGCCTT CGAACCGGAC GACAGCGCAA CCGCGCCGGG CCGCGTGCGC GTGACGGCGC TCGACATCCG CTTTCGCGGC CAGCGTGTCG CGGCCGTGTG GTTCGCGCCG CAGGCTGGCT CGCCAGGCGC GTACTACGAT CTCGACGGCA TGCCGCTCGC CGGTGCGCGG TTCGCGATGC CGGTCAACGC AACGCGAATC AGCTCGCAAT TTGGCGCGCG CGTGCATCCG GTCACGGGCG TCCGGCACGT CCATTCCGGC GTGGATCTGG CCGCGCCGAC GGGCCGTGCC GTCCACGCGT CGGAGCGCGG GGTCGTGGCT TTCATCGGCA CCGAGCCGGG CGGCTACGGC AAGTACGTGG TGATTCGGCA CGACGGCGGC TATGCGTCGT ACTACGCGCA TCTGTCGGCG TTCGAGCCGA CGCTGCGAAC CGGCGCGCGG GTCGTGCGCG GCCAGCGTGT CGGCGCGGTC GGCAGCACAG GCACCGCGAC CGGCCCGCAT CTGCACTTCG AGGTGCGGCG ACATGCCCGC CTCGTCGATC CGATCGAACT GGTGCAGGCG GCCAGGGCGG CGAAACTGAA GGGCGAGCAG CGGGTGGCGT TCAACCGCGT GGCCCGCGCC GCGCGCACCC AGCTGGCCGC GGCCACGTTG GCGCCGTCGC TCGCGATGTC GCAGCACGGC GCACCGAGCG ACGGCTGA
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Protein sequence | MRAGACAPYI VLCDAARDAI ERDYAARFAY GFASPLPAIG AAPAFDARPV DLASAEPFML AEQEHGTRAG AITGSLRASL ARADLPADVA AQITRMLAGR IDSAQRGAMG DTFRVAFEPD DSATAPGRVR VTALDIRFRG QRVAAVWFAP QAGSPGAYYD LDGMPLAGAR FAMPVNATRI SSQFGARVHP VTGVRHVHSG VDLAAPTGRA VHASERGVVA FIGTEPGGYG KYVVIRHDGG YASYYAHLSA FEPTLRTGAR VVRGQRVGAV GSTGTATGPH LHFEVRRHAR LVDPIELVQA ARAAKLKGEQ RVAFNRVARA ARTQLAAATL APSLAMSQHG APSDG
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