| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5063 |
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| Symbol | |
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| ID | 4313954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2084814 |
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| End bp | 2087699 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152906 |
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| Product | putative lipoprotein |
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| Protein accession | YP_776946 |
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| Protein GI | 115359808 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA GCCAGGTCAA GCGTGCGCTC CGGCTCGGAG CCGTCATGTC GGCCGTGCTG
CTTGCGTCGC AGGCGCACGC GGATGGGTTC AATGCAGCCG ATGCCGCTCG CGTGCCGAGC
GGTCAGTTCG TCACGCCGCT GGCCGTCCGT GGCGCGGTCC AGCAGTTCCT GAATCCCGGG
TTGCCCGCCT ATCCGCATTT CGTCGCGGGG GAGGCCGTGC GCTCGCAATT GAGCCCGGAC
GGCAAGACGC TGGCGATCAT CACCGCCGGC CAGAACTCGC TGTACAAACC GGACGGTTCC
GTCGACACCG CGAACTCGAC GCAATTCATC TTCCTGTACG ACGTGGCGGG CGCGAACAAG
ACGCGCCCCG TGCTCAGGCA GGTGCTGCAG CAGACCAACG CGTTCGTCGG CCTGGCGTTC
TCGCATGACG GGAGCACGCT CTACGCGACC GGCGGCAGCG ACGACGCGGT CTACGTCTAT
GCGCAGCACG GCGGCACGTG GGCGCTGTCG ACCACGATCG CGCTCGGCCA TGGGGGCAAG
GGTGTCGGCA TCCGCGTGCA GCCGAACGCG GCGGGGCTCG CGTTGTCGGC CGACGGCAAG
ACGCTGGTGG TCGCGAACAA CTACAACGAT TCGATCAGCG TGATCGATAC CGCGACCAAC
AACGTGCGCT ACGAGCACGA CCTGCGCCCG TTCTTTGCGG GCAACGAAGG CCGCAGCGGC
GACGCCGGCG GCACGTTCCC GTTCGCGGTC GTCGTGAAAG GCAACGGCGT CGCGTATGTG
TCGTCGGATC GCGATCGCGA AATTGTCGCG ATCGACGTGT CGTCGCCGTC TCGCGCTCGC
CTGGTCAAGC GCATCAAGCT GGACGGCAAC GCGCTCGGCA TGACGCTCGA CGCGTCGCAA
TCGAGGCTGT TCGTCGCGCA GGACAACGCC GACCAGGTCG CGGTGATCGA CACGAACACC
AACGCGATCG TGACGCGGAT CGACGCGCGC GCACCGTCCG GTGTGCTGGC GCACGGCCAG
ACGCACACGG GCGCGGCGAC GTATGCGGTC ACGCTGTCGC GCGACGGCCG GACGCTGTAT
GCGACCAACG CCGGCGCGAA CGAAATCGCG GTCATTCCGC TCGTCGGCGA GCGCGCGTAT
CACGTCACCG GATTGATTCC GACCGCCTTC GAGCCGCACG ACGTGACGTT CAGCGCGGAC
GGCACGTGGA TGTACGTGGT GAACGGCAAG AGCACGACCG GCCCGAACCC CGGCCACCTG
TTCGGCGCGA CACCTGCACA GGCCGCCGCG TCGCGCGCAT CGAACGAATA CCAGTTTCAG
CTCGAGCGCG CGTCGCTCGT GAGCGCGCCG GTGCCCGCGG CGGGCGAGCT GCCGAAGCTG
ACGCAGCAGG CCGCGCGCAA CAACTTCTAT CGCCCGGAAG ACAACGACCG GGATAACGAA
GTGATGGGCT TTCTGCGCCG TCACATCAAG CACGTGATCT ACGTCGTCAA GGAAAACCGC
ACGTTCGACC AGGTGCTCGG CGACCTCGGC AACGGGGCCG ACGGCGATCC GCGGCTCGCC
CAGTTCGGCC GGAACATCAC GCCGAACTTC CATCGGCTGG CGAGCCAGTT CGTGACGCTC
GACAACTTCA TGAACCCTGG CGACGGCAGC ATGGACGGCT GGTCCTGGGC GCTTCAGGGG
CGCGTCACCA ACACCGAGAC GATTACGCAG CAAATCAACT ACGCGGCGGT CAATCGCGGG
CTGTCGTACG AGAGCGAGGG CACGAACCGC AGCGTGCCGG TCAACTGGGA ATCGGTGCAG
CAGCGCGATG CGGCTGCCGG CCCGGCCGGC ACGACGAATT ACAGCAACGC GGCGGCCGGC
CTGCCGGGCG GCGCGGCGAA CCTGCTGCCC GGCACCGGCA ACCATGCGTC GTCCGATGCG
CCGTTCGGCC GCCAGCGCGG CTACATCTTC GATGCGGTGC TCGCCGGCGG CGGCACGGTC
CGCAACTACG GATTCCTCGT CAACAACATC GGCAGCATCG GCACGGCCGC GAACCCGATC
GTCGACCCGC GCGCGTCCGG CGTCGTCCAG GTCGCCGCAC TGGACCCGCG GCTGGCGTCG
ATGACCGACG TGTACTTCCG TGGCTTCGAC CAGACCTATC CGGACCAGTG GCGCCTGAAC
GAGTGGAAAC GCGAGTTCGA CCAGTATGTC GCGAGCGGCA ACCTGCCGAC GCTGTCGCTG
GTGCGCCTGT CCCACGATCA CATGGGCGCG TTCGGCACGG CGTTCGCCGG CGTGAATACG
CCGGAAACGC AGCAGGCAGA CAACGATCTG GCGGTCGGCC GGCTCGTCGA GGCCGTCGCG
AAGAGCCCCT ATGCGAGCGA CACGCTGATC GTCGTGACCG AGGACGACGT GCAGGATGGC
CCCGACCACG TGGATTCGCA TCGCGGGCCG GCGTACATCG TCGGGCCGTA CGTGAAGCAG
GGCGCGGTGA TCCGGACGCG CTACAGCCAG GTCAACGCGT TGCGGACCAT CGAGGACGTG
CTCGGCACGC AGCACATGAA CCTGAATACC GCCTACCAGC GACCGATGAG CGACGTGTTC
GACGTGCATG GCCCGGCGTC GTGGAGCTAT ACGGCGGTCG CGTCGAAGGC GCTGAAGGGC
ACCGGGCTGC GACTGGCCGA AGGGGCGGGC GAGAGCCTGC TGCACTACGC GGCCGGGCCC
GATGTCACGC CGACGCATGA CGCGGCGTAC TGGGCGAAGG TGACGGCGAA GTTCGACTTC
GACGATGCCG ACGAGGTGCC GGCGGATCAG TTCAACAGGG TCTTGTGGAA AGGCATGATG
GGATCGAAGC CGTATCCGAA GCTGCGGGGC GTGACGCAGA AGGTGGCGAG CCGCGACGAC
GATTGA
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| Protein sequence | MKNSQVKRAL RLGAVMSAVL LASQAHADGF NAADAARVPS GQFVTPLAVR GAVQQFLNPG
LPAYPHFVAG EAVRSQLSPD GKTLAIITAG QNSLYKPDGS VDTANSTQFI FLYDVAGANK
TRPVLRQVLQ QTNAFVGLAF SHDGSTLYAT GGSDDAVYVY AQHGGTWALS TTIALGHGGK
GVGIRVQPNA AGLALSADGK TLVVANNYND SISVIDTATN NVRYEHDLRP FFAGNEGRSG
DAGGTFPFAV VVKGNGVAYV SSDRDREIVA IDVSSPSRAR LVKRIKLDGN ALGMTLDASQ
SRLFVAQDNA DQVAVIDTNT NAIVTRIDAR APSGVLAHGQ THTGAATYAV TLSRDGRTLY
ATNAGANEIA VIPLVGERAY HVTGLIPTAF EPHDVTFSAD GTWMYVVNGK STTGPNPGHL
FGATPAQAAA SRASNEYQFQ LERASLVSAP VPAAGELPKL TQQAARNNFY RPEDNDRDNE
VMGFLRRHIK HVIYVVKENR TFDQVLGDLG NGADGDPRLA QFGRNITPNF HRLASQFVTL
DNFMNPGDGS MDGWSWALQG RVTNTETITQ QINYAAVNRG LSYESEGTNR SVPVNWESVQ
QRDAAAGPAG TTNYSNAAAG LPGGAANLLP GTGNHASSDA PFGRQRGYIF DAVLAGGGTV
RNYGFLVNNI GSIGTAANPI VDPRASGVVQ VAALDPRLAS MTDVYFRGFD QTYPDQWRLN
EWKREFDQYV ASGNLPTLSL VRLSHDHMGA FGTAFAGVNT PETQQADNDL AVGRLVEAVA
KSPYASDTLI VVTEDDVQDG PDHVDSHRGP AYIVGPYVKQ GAVIRTRYSQ VNALRTIEDV
LGTQHMNLNT AYQRPMSDVF DVHGPASWSY TAVASKALKG TGLRLAEGAG ESLLHYAAGP
DVTPTHDAAY WAKVTAKFDF DDADEVPADQ FNRVLWKGMM GSKPYPKLRG VTQKVASRDD
D
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