| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5040 |
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| Symbol | |
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| ID | 4313931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2058930 |
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| End bp | 2059619 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638152883 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_776923 |
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| Protein GI | 115359785 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.350334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTTCG AGATTGGCAG TTGCACATGC ATGGACGAAC TGGGCCGGAT GCTGATCGAC
ATCGGCCACC TCGCGGGCTT CGACCATGTT TGTTACCAAG AGTATCGGAT GAGCGGCGGG
ACACTGAAGA ATTGCCGCAC GCTGTCGAAC TACCCAGAGG CGTGGCTATC CCTCTATCGA
GATCGGGCTT ATCTGACGAT CGATCCGATT GCGCAGCACG CGCTATCGTC GTTGATGCCG
CTGATCTGGG GCGACCGCAT ATTCGCGACA ACCGAACAGC GCGAATTTCG AGACGAAGGC
CGCATATATG GGTTAAACGA CGGGGTGTCG TTTCCGGCGC ATAGCCGGCA TGGCGACGTG
GCATGCGTGA GCTTTGTTCG ACAGGCGCGG GCGTTGGACG ACGGCGACAT GCCCTGCGAC
GTCCCATCAT GGGGTGCCCT TGTCGCGAAT CTCATGCTTG ATGCGTGCCG CAGGCTGGAG
GCGGTGCAAT CCGATGCACC GTGCCTCAGT ACGCGTGAGC TCGAAATCCT CAAATGGGTT
GCTGAAGGAA AGTCGACTTG GGATATTTCG CGCATTGTGT CGCTGACCGA GCACGGCGTA
CTCCATCACA TCCGGAGCAT CATGAAGAAG TTCGACGTGC CGACGCGTCG GCAAGCCGTA
CTTATGGCGT CCAGATTTGG TTTGTTGTAA
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| Protein sequence | MVFEIGSCTC MDELGRMLID IGHLAGFDHV CYQEYRMSGG TLKNCRTLSN YPEAWLSLYR
DRAYLTIDPI AQHALSSLMP LIWGDRIFAT TEQREFRDEG RIYGLNDGVS FPAHSRHGDV
ACVSFVRQAR ALDDGDMPCD VPSWGALVAN LMLDACRRLE AVQSDAPCLS TRELEILKWV
AEGKSTWDIS RIVSLTEHGV LHHIRSIMKK FDVPTRRQAV LMASRFGLL
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