Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5000 |
Symbol | |
ID | 4313891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2020696 |
End bp | 2021340 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152843 |
Product | dehydrogenases with different specificities-like protein |
Protein accession | YP_776883 |
Protein GI | 115359745 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.456323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGTTTC GCGGAAGCGG GCGCGTCGGT CGTCGCGCTC GGGCTCGAGG CCGCCGGCCC GCATGCGCCG GTGCATCCCG GGATCCGCTG CGTGGAACTC GACGTGACCG ATGGCGAAGC GTTGACGCGC AGGATCCGCG CGCTGCCGCG CGTCGACGCG CTCGTCAACG GCGTCGGCAT CAGCCGGCAC GCCGACGAGT ACAGGCTGGA CCAGTTCGAG CTCGTGCTGA ACGTGAACCT GACGTCGGTG ATGCGGGCAT CCGACGCCGC CTGCCGGCGC TGTCGGCGAG CGGCGGCAGC ATCGTCAATG TCGCGTCGAT GTACACGTAC TTCGGCAGCA AGGACCGCCC GGCCTACAGC GCGAGCAAGG GCGGCATCGC GCAGCTCACG CGCTCGCTCG CGCAGGCGTG GGCCGAGCGC GGCATCCGCG TGAATGCAGT GGCGCCCGGC TGGATCGACA CGCCGCTCAG CAGCGGGCTG ATGGCCGACA CGCACGCGTC GCGGCGGATT CTCGAGCGCA CGCCGCTCGC GCGCTGGGGC ACGGCCGACG AGGTGGCGGA AGTGATCCTG TTCCTGTGCT CGCCCGGCGC GTCTTTCGTC ACCGGCGCGA TCGTGCCGGT GGACGGCGGG TATTCGACGG TATAG
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Protein sequence | MAFRGSGRVG RRARARGRRP ACAGASRDPL RGTRRDRWRS VDAQDPRAAA RRRARQRRRH QPARRRVQAG PVRARAEREP DVGDAGIRRR LPALSASGGS IVNVASMYTY FGSKDRPAYS ASKGGIAQLT RSLAQAWAER GIRVNAVAPG WIDTPLSSGL MADTHASRRI LERTPLARWG TADEVAEVIL FLCSPGASFV TGAIVPVDGG YSTV
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