Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4973 |
Symbol | tdh |
ID | 4313864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1990373 |
End bp | 1991401 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638152816 |
Product | L-threonine 3-dehydrogenase |
Protein accession | YP_776856 |
Protein GI | 115359718 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.554494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.41171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAC TGGCAAAGCT CGAACGCGGC CCGGGCCTCA CGCTCACGCG CGTGAAGCGC CCCGAAGTCG GACACAACGA CGTGCTGATC AAGATTCACC GCACGGCGAT CTGCGGCACC GACATCCATA TCTGGAAGTG GGACGACTGG GCGCAGAAAA CGATTCCCGT GCCGATGCAC GTCGGTCACG AATACGTCGG CGAGATCGTC GAGATGGGGC AGGAAGTGCG CGGCTTCGCG ATCGGCGATC GTGTGTCCGG CGAAGGCCAC ATCACGTGCG GCTTCTGTCG CAACTGTCGC GCGGGGCGCC GGCATCTGTG CCGCAACACC GTCGGCGTCG GCGTGAACCG CGAGGGCGCG TTCGCCGAGT ATCTGGCGAT TCCCGCGTTC AACGCGTTCA AGATCCCGCC CGAGATTTCC GACGATCTCG CGTCGATCTT CGATCCGTTC GGCAACGCGA CGCACACGGC GCTGTCGTTC AATCTCGTCG GCGAGGACGT GCTGATCACC GGCGCGGGCC CGATCGGCGT CATGGCCGCC GCGATCGCGA AGCATGTCGG CGCACGCAAC GTCGTGATCA CCGACATCAA CGACTACCGG CTCGAACTCG CGCGCAAGAT GGGTGCGACG CGCGCGGTCA ACGTGTCGCG CGAGTCGCTG CGCGACGTGA TGGCCGACCT GCACATGACG GAAGGCTTCG ACGTCGGCCT CGAGATGTCG GGCGTGCCGA GCGCGTTCAC CAGCATGCTC GAGGCGATGA ATCACGGCGG CAAGATTGCG CTGCTCGGCA TTCCGCCCGC GCAGACGGCG ATCGACTGGA ACCAGGTGAT CTTCAAGGGG CTCGAGATCA AGGGCATCTA CGGTCGCGAG ATGTTCGAGA CCTGGTACAA GATGGTCGCG ATGCTGCAAA GCGGCCTCGA TCTGTCGCCG ATCATCACGC ATCGCTTTGC GGCCGACGAT TACGAGAAAG GCTTCGCCGC TATGCTGTCC GGTGAAAGCG GCAAGGTGAT TCTCGACTGG ACGGTCTGA
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Protein sequence | MKALAKLERG PGLTLTRVKR PEVGHNDVLI KIHRTAICGT DIHIWKWDDW AQKTIPVPMH VGHEYVGEIV EMGQEVRGFA IGDRVSGEGH ITCGFCRNCR AGRRHLCRNT VGVGVNREGA FAEYLAIPAF NAFKIPPEIS DDLASIFDPF GNATHTALSF NLVGEDVLIT GAGPIGVMAA AIAKHVGARN VVITDINDYR LELARKMGAT RAVNVSRESL RDVMADLHMT EGFDVGLEMS GVPSAFTSML EAMNHGGKIA LLGIPPAQTA IDWNQVIFKG LEIKGIYGRE MFETWYKMVA MLQSGLDLSP IITHRFAADD YEKGFAAMLS GESGKVILDW TV
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