| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4946 |
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| Symbol | |
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| ID | 4313837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1960165 |
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| End bp | 1960809 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152789 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_776829 |
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| Protein GI | 115359691 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0203352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC CCGACACTGA CCGGCCCGCC GCCCGACTGC TGCTCGTCGA CGACCACCCG
CTGGTGCGCG ACGGCCTGCG GATGCGGCTC GAGGCGGCCG ACCTGTCCGT GGTCGGCGAA
GCCGGCAACG CCGACGAAGC GCTCGCGCTG GCCGCGTCGC TCGAGCCCGA TCTCGCGCTG
ATGGACGTCG GCATGAACGG GATGAACGGC ATCACGCTCG CCGGCGTGTT CCACGAACGC
TTTCCGGGGA TTCGCGTGCT GATGCTGTCG ATGCACGACA ACATCGAGTA CGTGACGCAG
GCCGTGCGCG CCGGCGCGAG CGGCTACCTC CTGAAGGATT CGCCGGCGAG CGAGATCGTC
CGCGCGATTG GCGCGGTGCT GGCCGGGCAG ACGTTCTTCA GCGAAGGGCT CGCGGCACGG
ATGATCCAGG CGAGCGCGAC CGCGTCGCCG CTCGACCGCT TGACGCCGCG CGAACGCGAC
ATCCTCGACG CGCTGGCCGA GGGGCTGTCG AGCAAGCAGA TCGCGCAGCA GACGGGGTTG
TCGGTGCGCA CGGTGGAAAC CCATCGGCTG AATCTGAAGC GCAAGCTCGA GATCGAAGGG
CAGGCGGAGC TGATCAAGTT CGCGGTCGAG CATCGGCGGC GATAG
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| Protein sequence | MSAPDTDRPA ARLLLVDDHP LVRDGLRMRL EAADLSVVGE AGNADEALAL AASLEPDLAL
MDVGMNGMNG ITLAGVFHER FPGIRVLMLS MHDNIEYVTQ AVRAGASGYL LKDSPASEIV
RAIGAVLAGQ TFFSEGLAAR MIQASATASP LDRLTPRERD ILDALAEGLS SKQIAQQTGL
SVRTVETHRL NLKRKLEIEG QAELIKFAVE HRRR
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