| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4936 |
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| Symbol | |
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| ID | 4313827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1947439 |
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| End bp | 1948917 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152779 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_776819 |
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| Protein GI | 115359681 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.121654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATTC CAATGCGTGA CGACGGGCCC GCGGCTCGCG CCGTCCAGAT CCTGAATCGC
CCCGTCTGTG ACCTGCTCGG CTGTGCGTGG CCGATCGTGC TCGCCGGCAT GGGCGGCGTC
GCGCGGGCGG AGCTCGCGAG CTCCGTAAGC GCGGCCGGCG GGTTCGGCTT TCTCGGGATG
GTGCGCGAGC CGGTCGCGCT GATCCGGCGC GAGGTCGAAC AGGTGCGCGC GGCCACCGAC
CGGCCGTTCG GCATCAACCT GATTCCCGCG TCGACGCCAC CCGAATTGCT CGATGCCCAG
CTCGACGCGT GTATCGCGTT GCGTGTGCCC GTCGTCGCGC TGTTCTGGGA CGTGATGCCG
GGCGTCGTGC GGCGTCTGCG CGACGCGGGC GTGCGGGTGG TTCATCAGGT CGGGTCGCTC
GACGATGCGC GTGCGGCCGA GGCCGCGGGT GCACAGGTGC TGATCGTTCA GGGGCATGAG
GCCGGCGGCC ATGTGCGTGG CGATCGGCCT CTGGCCGAGT TGCTGCCCGA CGTGGTGCGC
GCGACGCGCT TGCCGGTGCT CGCGGCAGGC GGGATCGTCG ACGGCGCGGA CGTGGCCGCC
GCGATGGCGC TCGGCGCGCA GGGCGCGGTG ATGGGCACGG CCTTCATCGC GACGCACGAG
TCGTTCGCGC ATGCGTACCA CCAGCAGCGG ATCGTCGATG CGCGCGACGG CGATACGCTG
TTGACCGATA TCTTTCACAT CAACTGGCCG CGCGGTGCGC GGGTTCGGGT GCTGCCGTCG
AGCGTGACGC GCGGCGAGCG GGGCGATCCG TTCGGCGACG AGCGCGTCGT GATCGGTGAC
GAGGAAGGGC GGCCGATCTA CCTGTTCAGC ACCGATTCGC CGCTGCGCAC GATGACGGGC
GATTTCGAGG CGATGGCGCT GTATGCGGGC ACGGGTGCCG GAAGGATCGG CGCGATCGAA
TCGGCCGGCG ACGTGCTGCG CCGGATCGTG CTCGATGCGG CGGCGATCGT CGAGAAAAAC
GCGGCTTCAT CGGCAGACGA CACGGATGAA AACCGGGCGG CCTTGCTCGC GGCGCTCGAT
GAATTGCTGG AGGCGGAGCG CGCGGGAGCC CGCGTCGCGT CGGAGACGGC GGCCGAGGTC
CATGACGATC CCGAACTGCG TCGGCTGATC GCGCATATTC GCCAGGACGA AGCGCACTGG
TGCAGCGTGC TGGTCGATGC GATCCGCACG CTCGGCGCGA CGCCGACGCG CGCGACCGGG
TCGTTCTATG AAAAGGCGAT GGCGATCGAC GACTTAGCCG AGCGGATAAC GTTTTTGAAC
CGCGGCCAGC GATGGGTCGT GCGCAAGCTG CGGGCGCTGC TGCCGACGCT CGCGGATCCG
GACATCCATC ACGCGCTGTC GTTGATGCTG GTCGCGCATG AGAAGAACAT CGGTGCGGTG
GATGCGCGGT TGAGGGAGGG TGGGGCGGGC GACGCATAG
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| Protein sequence | MSIPMRDDGP AARAVQILNR PVCDLLGCAW PIVLAGMGGV ARAELASSVS AAGGFGFLGM
VREPVALIRR EVEQVRAATD RPFGINLIPA STPPELLDAQ LDACIALRVP VVALFWDVMP
GVVRRLRDAG VRVVHQVGSL DDARAAEAAG AQVLIVQGHE AGGHVRGDRP LAELLPDVVR
ATRLPVLAAG GIVDGADVAA AMALGAQGAV MGTAFIATHE SFAHAYHQQR IVDARDGDTL
LTDIFHINWP RGARVRVLPS SVTRGERGDP FGDERVVIGD EEGRPIYLFS TDSPLRTMTG
DFEAMALYAG TGAGRIGAIE SAGDVLRRIV LDAAAIVEKN AASSADDTDE NRAALLAALD
ELLEAERAGA RVASETAAEV HDDPELRRLI AHIRQDEAHW CSVLVDAIRT LGATPTRATG
SFYEKAMAID DLAERITFLN RGQRWVVRKL RALLPTLADP DIHHALSLML VAHEKNIGAV
DARLREGGAG DA
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