| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4925 |
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| Symbol | |
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| ID | 4313816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1932532 |
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| End bp | 1934283 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152768 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_776808 |
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| Protein GI | 115359670 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.119091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAA CAAAACCCAG GCTGCGCTCC ACCCAATGGT TCGGCACGAA CGACAAGAAC
GGCTTCATGT ACCGAAGCTG GATGAAGAAC CAGGGCATCC CCGATCACGA GTTCGACGGT
CGGCCGATCA TCGGCATCTG CAACACGTGG TCCGAACTGA CGCCGTGCAA TGCGCACTTC
CGCAAGCTCG CCGAGCACGT GAAGCGCGGG ATCTTCGAGG CGGGCGGGTT CCCGGTCGAG
TTCCCGGTGT TCTCGAACGG TGAATCGAAC CTGCGGCCGT CGGCGATGCT CACGCGCAAC
CTGGCGTCGA TGGACGTCGA GGAAGCGATC CGCGGCAATC CGATCGACGC GGTCGTGCTG
CTCGCCGGCT GCGACAAGAC GACCCCCGCG CTGCTGATGG GCGCGGCGAG CTGCGACGTG
CCGGCGATCG TCGTGTCGGG CGGCCCGATG CTGAACGGCA AGCTCGAAGG CAAGAACATC
GGCTCGGGCA CCGCCGTGTG GCAACTGCAC GAATCGCTGA AGGCCGGCGA GATCGACCTG
CATCACTTCC TGTCGGCCGA AGCCGGCATG TCGCGCTCGG CCGGCACCTG CAACACGATG
GGCACCGCGT CGACGATGGC GTGCATGGCC GAGGCGCTCG GCGTGGCGCT GCCGCACAAC
GCGGCGATTC CGGCCGTCGA TTCGCGCCGC TACGTGCTCG CGCACATGTC CGGCATCCGG
ATCGTCGAGA TGGCGCTCGA AGGGCTCGTG CTGTCGAAGG TGCTGACGCG CGCGGCGTTC
GAGAACGCGA TCCGCGCGAA CGCGGCGATC GGCGGCTCGA CCAACGCGGT GATCCATCTG
AAGGCGATCG CGGGCCGCAT CGGCGTGCCG CTCGAGCTCG AGGACTGGAT GCGTATCGGC
CGCGACACGC CGACGATCGT CGACCTGATG CCGTCCGGGC GCTTCCTGAT GGAGGAGTTC
TATTACGCGG GCGGCCTGCC GGCCGTGCTG CGCCGGCTCG GCGAAGGCGG GCTGCTGCCG
CACCCCGACG CGCTGACGGT CAACGGCAAG TCGCTGTGGG ACAACGTGCG CGAAGCGCCG
AACTACGACG ACGAGGTGAT CCGCCCGCTC GACCGGCCGC TGATCGCCGA CGGCGGGATC
TGCATCCTGC GCGGCAATCT CGCGCCGCGC GGCGCGGTGC TGAAGCCGTC GGCGGCGAGC
CCCGAGCTGC TGAAGCATCG CGGCCGCGCG GTGGTGTTCG AGAACCTCGA GCACTACAAG
GCGACGATCA ACGACGAAGC GCTCGACGTC GATGCGAGTT CGGTGATGGT GCTGAAGAAC
TGCGGGCCGC GCGGTTATCC GGGGATGGCG GAGGTCGGCA ACATGGGGTT GCCGCCGAAG
CTGCTGCGCC AGGGCGTGAA GGACATGGTG CGGATCTCGG ACGCGCGGAT GAGCGGCACC
GCGTATGGCA CGGTGGTGCT GCACGTCGCG CCGGAAGCGG CCGCGGGCGG GCCGCTGGCC
GCCGTGCGCA ACGGCGACTG GATCGAGCTC GACTGCGAGG CCGGCACGCT GCACCTGGAC
ATTCCGGACG ACGAACTGCA GCGCCGCCTG TCGGACGTCG ATCCGACAGC GGCGCCGGGC
GTGGCCGCGC AGCTCGGCAA GGGCGGCTAC GCGCGGCTGT ATATCGATCA CGTGCTGCAG
GCCGACGAGG GGTGCGACCT CGACTTCCTG GTCGGCATGC GCGGCGCGGA CGTGCCGAGC
CATTCGCATT GA
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| Protein sequence | MSATKPRLRS TQWFGTNDKN GFMYRSWMKN QGIPDHEFDG RPIIGICNTW SELTPCNAHF
RKLAEHVKRG IFEAGGFPVE FPVFSNGESN LRPSAMLTRN LASMDVEEAI RGNPIDAVVL
LAGCDKTTPA LLMGAASCDV PAIVVSGGPM LNGKLEGKNI GSGTAVWQLH ESLKAGEIDL
HHFLSAEAGM SRSAGTCNTM GTASTMACMA EALGVALPHN AAIPAVDSRR YVLAHMSGIR
IVEMALEGLV LSKVLTRAAF ENAIRANAAI GGSTNAVIHL KAIAGRIGVP LELEDWMRIG
RDTPTIVDLM PSGRFLMEEF YYAGGLPAVL RRLGEGGLLP HPDALTVNGK SLWDNVREAP
NYDDEVIRPL DRPLIADGGI CILRGNLAPR GAVLKPSAAS PELLKHRGRA VVFENLEHYK
ATINDEALDV DASSVMVLKN CGPRGYPGMA EVGNMGLPPK LLRQGVKDMV RISDARMSGT
AYGTVVLHVA PEAAAGGPLA AVRNGDWIEL DCEAGTLHLD IPDDELQRRL SDVDPTAAPG
VAAQLGKGGY ARLYIDHVLQ ADEGCDLDFL VGMRGADVPS HSH
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