Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4918 |
Symbol | |
ID | 4313809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1924338 |
End bp | 1925237 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152761 |
Product | SMP-30/gluconolaconase/LRE domain-containing protein |
Protein accession | YP_776801 |
Protein GI | 115359663 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.117058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.866361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGA TTGATCCGGC CGCGTCGGCG ACGCGGCTGG CGGACACCCG CAACACGCTC GGCGAAGGCG CGACGTGGTG CGACAAGACG CACGCGCTGT ATTGGGTGGA TATCGAAGGC GCGCAACTGT GGCGCTGCCG CGCGGACGGT TCGGACCTCA CGCAGTGGCC GATGCCCGAA CGGCTTGCGT GCTTCGCGCT GACGCACGAT CCGGACGTGC TGCTCGTCGG GCTCGCGACG CAACTCGCGT TCTTCGACCT GCGCAGCGGC GCGTTCACGC GGATCGTCGA CGTCGAGCCC GATCTGCCGA CGCGCCTGAA CGACGGGCGC TGCGATCCGT CCGGCGCGTT CGTGTTCGGG ATGAAAGACG AGGGCGGTGA CCCGCCGCGC GCGGTCGGCG GGTTTTACCG GCTCAATGCC GACCTCACGC TCGAACGGCT CGCGTTGCCG CCGGCCGCGA TCGCGAACAG CATCGCGTTC TCGCCGGACG GCTCGAAGAT GTACTTCTGC GATTCGCTCG TGCGTGAAAT CCTCGTGTGC GATTACGGCC GCGCGGGTGT GGCCGGCGTG CGGCCGTTCG CGCGGCTGAC CGATGCGGAT GGCGACCCGG ACGGCTCGAC GATGGACCGC GACGGCGGCC TGTGGAACGC GCAGTGGGGC GGCCGGCGGG TGGTGCGCTA CGCCGCGGAC GGCGTCGAGA CGGAACGCAT CGCGGTGCCG ACCGCGCAGC CGAGCTGCGT GACGCTCGAT GGCGAAGGCC GGTTGTACGT GACGAGTGCG CGTGTTGGGC TGAGCGACGA CGCGCTGGCG AGCGATGCCG ATGCCGGCGG CGTGTTCGTC GCGCAGACGC GCCATGCGGG GCTGCCGACC GCGCGATTCA TGGGCGCGCC GCGCGGCTGA
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Protein sequence | MQQIDPAASA TRLADTRNTL GEGATWCDKT HALYWVDIEG AQLWRCRADG SDLTQWPMPE RLACFALTHD PDVLLVGLAT QLAFFDLRSG AFTRIVDVEP DLPTRLNDGR CDPSGAFVFG MKDEGGDPPR AVGGFYRLNA DLTLERLALP PAAIANSIAF SPDGSKMYFC DSLVREILVC DYGRAGVAGV RPFARLTDAD GDPDGSTMDR DGGLWNAQWG GRRVVRYAAD GVETERIAVP TAQPSCVTLD GEGRLYVTSA RVGLSDDALA SDADAGGVFV AQTRHAGLPT ARFMGAPRG
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