Gene Bamb_4917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4917 
Symbol 
ID4313808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand- 
Start bp1923662 
End bp1924165 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content71% 
IMG OID638152760 
ProductMarR family transcriptional regulator 
Protein accessionYP_776800 
Protein GI115359662 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.36194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.834518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG CACCGACCAA GCCCGCGCCT CCGAAGAACA CCGCGAAGAA CGCCGCCCGC 
GCGACGGGCG ACAAGCCGAA GGCGCGCGCG CCGCAGCGCC TGACCTACGT GATCGGCGGT 
CTCGACCGGC TGCTGCGCCG GCATATGACC GACGCGCTCG CACCGCTCGG CATCACGCTG 
GCGCAATACA CGGCGCTGTC GGTGCTGGAG GCGCGCGGCG CGTCGTCGAA TGCGCAACTG 
GCCGAGCGCT CATGGATCAC GCCGCAATCG GCGAACGAGG TGATGAGCGT GATGGCCGCC 
CGCGGTTTCG TCACGCGCGA GGCCGACCCG TCGCACGGCC GCATCATCCT GCTGACGCTG 
ACCGACGCAG GCGCGGCGAT GCTGCGTGAA TGCGAAGCCG TGCTGCGTCC GCTCGAGACG 
CGCATGCTCG GCGACATCTC CGCCGACGAC GCCGCGCACG TGCAGCGCGC GCTCGAACTG 
TTCTCGCGCA ACCTGCGCGG CTGA
 
Protein sequence
MSSAPTKPAP PKNTAKNAAR ATGDKPKARA PQRLTYVIGG LDRLLRRHMT DALAPLGITL 
AQYTALSVLE ARGASSNAQL AERSWITPQS ANEVMSVMAA RGFVTREADP SHGRIILLTL 
TDAGAAMLRE CEAVLRPLET RMLGDISADD AAHVQRALEL FSRNLRG