| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4858 |
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| Symbol | |
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| ID | 4313749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1859563 |
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| End bp | 1861884 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638152701 |
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| Product | phospholipase C |
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| Protein accession | YP_776741 |
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| Protein GI | 115359603 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.604907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAC GCCGCAAATT TCTTCAGCAA ACCGCGACTT CCGGCCTCGC CGCCGCCGCG
CTGTCCGCGT TTCCGCCGAG CATCCGCCGC GCGCTCGCGA TTCCCGCGTT TCACGAAACG
GGGACCATCA AGGACGTCAA GCACGTCGTG CTGCTGATGA TGGAAAACCG CGGGTTCGAC
GGCTACTTCG GCACCTTCAA GGGCGTGCGC GGTTACGGCG ACCGCTTCGC GGTGCCGTCG
CCGAACGGCC GCGACGTGTT CCACCAGACC TACACGAAAG CAACGCCCGC GACGACCATC
ACGCCGTACC ACCTCGATGC GCGCCAGGGC AACGCGCAGC GCGCGGGCGG CACGCCGCAC
ACGTGGGCCG ACTCGCAGGC CGCGTGGGAC CATGGCCGGA TGAACCGCTG GCCGGACGCG
AAGACGCCGC TGTCGATGGG CTATTACGAC GCGGCCGAAG TGCCGTTCCA GCGCGCGCTC
GCCGACGCGT TCACGCTGTG CGACCACTAC CACTGCGGGA TGCACACGGG CACGATCGCG
AACCGGCTGT TCTACTGGAG CGGCACCAAC GGCCCGAACG GCATCAACCC GGCCGACGGC
AGCCGCGTGA AGCTCGCCGC GCTGAACAAC CAGTTCAACG GCGGCAACGA CATCGGCCCG
TCGAGCCAGG GCTGGACGTG GACGACCTAC GCGGACCGGC TGCAGCAGGC CGGCGTGAAC
TGGAAGGTCT ACCAGAGCCT GATCGACAAC TTCGGCTGCA ACGAGATGAT GAGCTTTTGC
CACTGGCGCG CGGCCATCGA GCAGATGCCG GCCGCACGCC GGCCCGCGTA CGTCGCGTCG
ACGGACATCA CGCAGCCGGT GACGGCGGCC GGCGCGTTCT ACGATCCGGC GATCGACGAT
CCGTTGAGCC CGCTCGCGAA GGGTTTCGGC AACACGATGC CGCATGGCTT CCTCGAAACG
TTCCGTGATG ACATCCGCAA CGGCACGCTG CCCGAGGTGT CGTGGATCAT CCCGCCTTCC
GTGTACAGCG AACATCCTGG GCCGTCGAGC CCCGCGCAGG GCGCGTGGTA CGTGCAGGCG
GTGCTCGACG CGCTGACCGC GAACCCGGAC GTATGGAGCA AGACCGTGCT GCTGATCAAC
TACGACGAGA ACGACGGCTT CTTCGATCAC ATGCCGTCGC CGGCCGTGCC GTCGCGCAAC
GCGGACGGCT CGCTCGCGGG CGGCCATACG CTCGCGGCTG CCGACGTGGC CGTCGAGTAT
CACGACTTCG CGCCGGCCAC GTCGAGCCAG CCCGCGGCCG ACGGCCGTCC GTACGGCCCG
GGCCCGCGCG TGCCGATGTG GGTCGTATCG CCGTGGAGCC GCGGCGGCTG GGTCAACTCG
CAGGTATTCG ACCATACGTC GACGCTGCTT TTCCTCGAGA AGCGCTTCGG CGTGGTCGAG
CCGCAGATCA GCGCGTATCG CCGCGCGGTG TGCGGCGACC TGACGAGCGC GTTCAACTTC
CGCACGCCGA ACAACGAACC GCTGCCGACG CTCGCGGGCC GCACGACGAA AAGCCAGGTG
GACGCACTGA GCGCCGCGCA GCAGGCCGCG CCGAAGATCA CGCCGCCGGC CACGCCGTCG
CTGCCCGCGC AGGCCACCGG CGTGCGCCCG TCGCGCGCGC TGCCGTACGA GCTGCATGCG
AGCGCGCAGG TCGATGCCGG CAAGGGCACC GTCACGCTGA AGTTCGCGAA CACCGGCCGC
GCGGCGGCGG TGTTCCACGT CTACGACAAG CTGCACCTCG ACCGCGTGCC GCGCCGCTAC
GTCGTCGAGC CGGGCAAGGC GCTGCGCGGC GACTGGGCGG CGCTCGCCGA CGACAGCGGC
AAATATGACC TGTGGGTGCT CGGCCCGAAC GGCTATCACC GCCGCTTCAC CGGCGACCTG
GCCCGGCTGG CCGGCGGGCG GGCGCCGCAC CCGGAGATCC GGGTCGGCTA TGCGGGCGCG
AGCGGCAATC TGCATCTGCG GCTGCGCAAC GACGGCGGCA GCCCCGTGCG CTTCACGGTG
AAGTCGAACG AGGTATACGG CGCGCTGTCC GGCCGCGGCG CGAACGACGA TCACCGCCAC
GGCCACGAGA ACGACAACCG CGCCGGCACG ACGTGGACCG TCACGGTGCA CGCCGGCAGC
CAGTCGGAAC TGCACTGGAA GCTCGACTCG ACCGGCCACT GGTACGACTT CGTCGTCACC
GCCGACAGCG ACGCGAGCTT CTCGCGCCGC GTGGCCGGCC GCGTCGAAAC GGGCCGCCAT
TCGGTCAGCG ACCCGGCGAT GGGGCTCGCC GACCGCTTCT GA
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| Protein sequence | MTSRRKFLQQ TATSGLAAAA LSAFPPSIRR ALAIPAFHET GTIKDVKHVV LLMMENRGFD
GYFGTFKGVR GYGDRFAVPS PNGRDVFHQT YTKATPATTI TPYHLDARQG NAQRAGGTPH
TWADSQAAWD HGRMNRWPDA KTPLSMGYYD AAEVPFQRAL ADAFTLCDHY HCGMHTGTIA
NRLFYWSGTN GPNGINPADG SRVKLAALNN QFNGGNDIGP SSQGWTWTTY ADRLQQAGVN
WKVYQSLIDN FGCNEMMSFC HWRAAIEQMP AARRPAYVAS TDITQPVTAA GAFYDPAIDD
PLSPLAKGFG NTMPHGFLET FRDDIRNGTL PEVSWIIPPS VYSEHPGPSS PAQGAWYVQA
VLDALTANPD VWSKTVLLIN YDENDGFFDH MPSPAVPSRN ADGSLAGGHT LAAADVAVEY
HDFAPATSSQ PAADGRPYGP GPRVPMWVVS PWSRGGWVNS QVFDHTSTLL FLEKRFGVVE
PQISAYRRAV CGDLTSAFNF RTPNNEPLPT LAGRTTKSQV DALSAAQQAA PKITPPATPS
LPAQATGVRP SRALPYELHA SAQVDAGKGT VTLKFANTGR AAAVFHVYDK LHLDRVPRRY
VVEPGKALRG DWAALADDSG KYDLWVLGPN GYHRRFTGDL ARLAGGRAPH PEIRVGYAGA
SGNLHLRLRN DGGSPVRFTV KSNEVYGALS GRGANDDHRH GHENDNRAGT TWTVTVHAGS
QSELHWKLDS TGHWYDFVVT ADSDASFSRR VAGRVETGRH SVSDPAMGLA DRF
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