| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4779 |
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| Symbol | |
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| ID | 4313671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1770410 |
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| End bp | 1772527 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638152623 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_776663 |
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| Protein GI | 115359525 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.819685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC ACACCGCCAA CCCTCCGCCG CCACCGGCGC CGCCTCCTGC ATCGCCGCGC
CGCCGTGCAT GGCGGATCCT CGCAGGCGCG CTGCTCGGCC TGACGCTCGC ATGCGCGGGC
ATCGGCGCAT GGACGATCGA CCGCATCTGG ACGCAATTGC CGTCCATCGA ACATCTGGCC
GACTACCGTC CCGCGTTGCC GCTGCGGATT TTCTCGCGTG ACGGCGAGCT GCTGGCCGAG
TACGGCGTCG AGCGCCGCGA GTTCGTGCCG CTCGAACGCA TTCCGCCGCT GATGCGGCAC
GCGCTGCTCG CGGCCGAGGA CGCGAAGTTC TATCAGCACG GCGCGATCGA TGTCGGCGGC
CTCGCGCGCG CGACGTTCGC GAACCTCGTG ACGGGGCAGC CGGGGCAGGG CGGCAGCACG
ATCACGATGC AGGTCGCCCG CAACTTCTAC CTGACGCGCG ACAAGGTGCT GAGCCGCAAG
CTCGCCGAGA TCCTGATGGC GATCAAGCTC GAGCGCCAAT ACGGCAAGGA CAAGCTGCTC
GAGCTGTACA TGAACCAGAT CTATCTCGGC GAGCGCGCGT ACGGTTTCGC GGCGGCCGCG
AACGTCTATT TCGGCAAGCC GCTCGACGCG CTGAGCGCGG GCGAGGCGGC CGTCCTCGCC
GGGCTGCCGA AGGCGCCGTC CGCGTTCAAT CCGGTCGTCA ACCCGGCACG CGCGACCGCG
CGGCGCAACT ACGTGCTCGG CCGCATGCAT GCGCTCGGCG AGCTCGACGA TGCGGCGTAT
CGCGCGGCCG TCGACGCGCC GATCGCGCTC GCGACCACGC CGCCGCCCGG CATCATCGCG
GCGCCGTACG TCGCGGAGCG CGCGCGTCGG ATGATGGTCG AGCGATTCCA TGACGACGCC
TACACGCTGG GCCTCGACGT GACGACGACG ATTACGATGC GCGACCAGCG CGCGGCCGAA
GCCGCGCTCG ACCGCACGCT GAGCCGGCAG CCACGCGCGA AGCGCGATGC GCGCAACGGG
CTCGAGGGCG CGCTCGTGTC GCTCGATGCG GCCACCGGCG ACATGCTGGC GCTCGTCGGC
GGCGCGGATT TCAACGGCAA CGTGTTCGAC CACGCATTGC AGGCGTATCG GCAGCCGGGT
TCGAGCTTCA AGCCGTTCGT CTATTCGGCG GCGCTGGAGA AGGGCTATTT CCCCGGCGTG
CTGGTCGACG ATACGCAGCG CACGCTCACG CATGCGGAAA CCGGCGCGCG GCCGTGGCGT
CCGCGCAATT ACGGCAACCG GTACGAGGGC TTCATCCCGG TGCGGCGTGG GCTCGTGCGC
TCGAAGAACC TCGTCGCGGT CAACCTGATG CAGGCCGCCG ACGCGCGCTA CGTGCAGCAG
CACGCGGTGG GCTTCGGTTT TGACGCGCAG CGCAATCCGG CGTCGCTGCC GCTCGCGCTC
GGCGCGGGCG CCGTGACGCC GCTCGAACTC GCGAGCGCGT ACGGCGTGTT CGCGAACGGC
GGGAGGCGGA TGGTGCCGCG GCTGATCCTG TCGGTGAAGC AGCGTCACGG CGGCGCGCTG
TACGACGCGC CGACGCCGGA CGGCACGCGC GTCGTGTCGG CGCGTAATGC GTTCGTGATG
GACAGCATGT TGCGCGACGT CGTGCGGGCC GGCACTGCGC GCGGCGCGCT CGCGTTGCGC
CGCGACGACG CGGCCGGCAA GACCGGCACG TCGAACGGCT CGAAGGACGT ATGGTTCGCG
GGCTATTCGT CGGGCATCGT CGCGGTCGCG TGGCTCGGCT ACGACCCCCC GCGGCCGATG
GGGCGCGCGA CCGGCGCGAC GCTCGCGCTG CCGGTCTGGC TCGACTACAT GAAGACGGCG
GTTGCCGGAC GCACGCCGGT CGACGCAACG CCGCCGCAGG ACCTCGCGCT CGTCGACGGC
GATTTCGTGT ACGCCGAATA CACGCGCGGC ACCTGCACCG CCGACGTGCC GCCGTACATC
CGCAGCCGCT TCGCGTGCGG CGCCGCGCCG GAATCCGATG CGACGGACGC ACACGACAAG
CGCGACGAGC CGATGCCCGC GGCCGTCGAT GCGGCCGAGC GCGAACGCGT GCTCGACCTG
TTCCGTACCG AGGACTGA
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| Protein sequence | MTDHTANPPP PPAPPPASPR RRAWRILAGA LLGLTLACAG IGAWTIDRIW TQLPSIEHLA
DYRPALPLRI FSRDGELLAE YGVERREFVP LERIPPLMRH ALLAAEDAKF YQHGAIDVGG
LARATFANLV TGQPGQGGST ITMQVARNFY LTRDKVLSRK LAEILMAIKL ERQYGKDKLL
ELYMNQIYLG ERAYGFAAAA NVYFGKPLDA LSAGEAAVLA GLPKAPSAFN PVVNPARATA
RRNYVLGRMH ALGELDDAAY RAAVDAPIAL ATTPPPGIIA APYVAERARR MMVERFHDDA
YTLGLDVTTT ITMRDQRAAE AALDRTLSRQ PRAKRDARNG LEGALVSLDA ATGDMLALVG
GADFNGNVFD HALQAYRQPG SSFKPFVYSA ALEKGYFPGV LVDDTQRTLT HAETGARPWR
PRNYGNRYEG FIPVRRGLVR SKNLVAVNLM QAADARYVQQ HAVGFGFDAQ RNPASLPLAL
GAGAVTPLEL ASAYGVFANG GRRMVPRLIL SVKQRHGGAL YDAPTPDGTR VVSARNAFVM
DSMLRDVVRA GTARGALALR RDDAAGKTGT SNGSKDVWFA GYSSGIVAVA WLGYDPPRPM
GRATGATLAL PVWLDYMKTA VAGRTPVDAT PPQDLALVDG DFVYAEYTRG TCTADVPPYI
RSRFACGAAP ESDATDAHDK RDEPMPAAVD AAERERVLDL FRTED
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