Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4772 |
Symbol | |
ID | 4313664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1762968 |
End bp | 1765277 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638152616 |
Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
Protein accession | YP_776656 |
Protein GI | 115359518 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.784759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATTGCT ATTCGCTGGC GCGGCGGCCG ATCTGTGCCG CGCTGTTCGG CGTGTTCGGC CTGTCCGCCG CCCCCGCTTA CGCCGATTCC ACCGCTAACG CCGCTGACGC CACTTATGTC GATTCGTCGT CGAAGGGCGC CAACCCGCCG TCTGCCGTCC TAGTCGCCGC ATCCACGCGC GGCGATGCGG CGCTGCTCGA CCCCGTCACC GTCACGGCCA CCCGTACCGC CACCGCCGCG AGCCGCACGG CCGCGTCCGT GTCGGTGATC ACCGACGACG ATCTCGAGGA ACAGCAGGCC ACCAACATCA AGGACGCGCT GCGCTACGAG CCGGGCGTCA CGGTGCGCCG CACCGCGTAT CGCCCCGGCA GCGCCGCACT CGGCGGCGGC CGCGACGGCG ATTCGAGCAT CAACATCCGC GGCCTCGAAG GCAATCGCGT GCTGCTGATG GAAGACGGCA TCCGCCTGCC GAACGCGTTC TCGTTCGGGC CGCTCGAAGC CGGGCGCGGC GACTACTCCG ATGTCGACAC GCTTAAGCGT ATCGAGATCC TGCGCGGGCC GGCATCGGCG CTGTACGGCA GCGACGGGCT GACCGGCGCG GTGAACTTCA TCACGAAGGA TCCGCGCGAC CTGCTGTCGA TCTACGGCAA GCCCATCTAC TTCTCGTTCC GGCCGAGCTA CGACTCGGCC GATCGCAGCG TCGGCGCGAC GGTGTCGGCC GCGGGCGGCA ACGACCGCGT GCAGGGGATG ATCATCGCCG ACGGCCGGCG CGGCCACGAA GTCGACACGC GCGGCAGCAA CAATTCGGCG AGCACGCTGC GCACGACGTC GAACCCGCAG GACGTCTATT CGGAATCGCT GCTCGGCAAA TTCGTGCTGA CGCCCACCGC GCGCGACACG ATCAAGTTCA CAGCCGAAAC CGTGCAGCGG CGCGTGAGCA CCGACGTGCT GTCCGCGATC AACCCGCCGA CCACGCTCGG CCTCACGACG AACGACCGCC TCGAGCGCAA CCGCTTCAGC GTCGACTACG ACTTCCGCGA CGATGCGTTG CGCTGGTTCC AGACCGCGCA CGTGCAGTTC TACTACCAGG ACGCGAAGCA GGATCAATAC GCGTTCGAGA CGCGCGGCAG GCAGCCTTCG CGCTCCCGCG ACAACCAGTA CCAGGAGCGC ACGTTCGGCG GTTCCGCGTT CGCCGAAAGC GGCTTCTCGA CCGGCCCGCT CGCGCACAAG CTGCTGTACG GCGTCGACGG CAGCCTGTCG CGCGTGACGA ACCTGCGCGA CGGCACGGTG CCGGGCGTCG GCGAGGCGTT CCCGAACAAG GCGTTTCCCG ATACCGACTA CACGCTGTTC GGCGCGTTCG TGCAGGACCA GATCGGTTAC GGCCGCCTGC TCGTCACGCC GGGGCTGCGC TTCGATACGT ACCGGCTGAG CGCGTCGCAG AACGATCCGT TGTTCACCGG CACCGCGGTG TCGACGAGCG CGAACGAAGT GTCGCCACGC GTCGCGGTGC TCTACGAGAT CACGCCCGCG CTGATTCCGT ATGCGCAATA CGCGCACGGC TTCCGCGCGC CGACACCCGA TCAAGTGAAC AGCAGCTTCT CGAACCCGGT GTACGGCTAC ACGTCGATCG GCAATCCGAA CCTGAAGCCG GAGACCAGCG ACACGTTCGA AGCGGGCCTG CGCGGCAAGG CCGGCACCGG CTACGGCGTC GTGCGCTACA GCGCGGCCGC GTTCACCGGC CGCTACCGCA ACTTCATCTC GCGCACGACG ATCTCGGGCA GCGGCCGGCC GGTCGACCCG TTCGTGTTCC AGTACGTGAA CTTCGCCGAC GCGCGCATCC ACGGCTTCGA AGGCCGCGCC GAATGGGTGA TGCCCAACGG CATCACGTTG AAGACGGCGA TGGCGTTCAC GAAGGGCTCG ACGCAGAACA ACGGCGCGGC CAGTCAGCCG CTCGATACGG TCACCCCGTT CTCGGCCGTG TTCGGCGTGC GCTACGAACC GGGCGAGCGC TGGTTCGTGC AGACCGACCT GCTGTTCCAG GCCGCGAAAC GCGACAAGGA CATCCCGGCA GATGCGTGCC CGGGAGCCAG AACGTCGTGC TTCGCGCCGC CGTCGTCGTT CGTCGTCGAC CTGCGCGGCG GCTACCGCTT CAACAAGCAC GTGAGCGCGA CGATCGGCAT TCGCAACCTG TTCGATCGCA AGTACTGGAA CTGGTCGGAC GTGCGCGGCA TCGCGGCCGA TTCGCAGGTG CTCGACGCGT ACACGTCGTC CGGGCGCACC GTCGCCGTCA GCATGAAGGT GGATTTTTGA
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Protein sequence | MHCYSLARRP ICAALFGVFG LSAAPAYADS TANAADATYV DSSSKGANPP SAVLVAASTR GDAALLDPVT VTATRTATAA SRTAASVSVI TDDDLEEQQA TNIKDALRYE PGVTVRRTAY RPGSAALGGG RDGDSSINIR GLEGNRVLLM EDGIRLPNAF SFGPLEAGRG DYSDVDTLKR IEILRGPASA LYGSDGLTGA VNFITKDPRD LLSIYGKPIY FSFRPSYDSA DRSVGATVSA AGGNDRVQGM IIADGRRGHE VDTRGSNNSA STLRTTSNPQ DVYSESLLGK FVLTPTARDT IKFTAETVQR RVSTDVLSAI NPPTTLGLTT NDRLERNRFS VDYDFRDDAL RWFQTAHVQF YYQDAKQDQY AFETRGRQPS RSRDNQYQER TFGGSAFAES GFSTGPLAHK LLYGVDGSLS RVTNLRDGTV PGVGEAFPNK AFPDTDYTLF GAFVQDQIGY GRLLVTPGLR FDTYRLSASQ NDPLFTGTAV STSANEVSPR VAVLYEITPA LIPYAQYAHG FRAPTPDQVN SSFSNPVYGY TSIGNPNLKP ETSDTFEAGL RGKAGTGYGV VRYSAAAFTG RYRNFISRTT ISGSGRPVDP FVFQYVNFAD ARIHGFEGRA EWVMPNGITL KTAMAFTKGS TQNNGAASQP LDTVTPFSAV FGVRYEPGER WFVQTDLLFQ AAKRDKDIPA DACPGARTSC FAPPSSFVVD LRGGYRFNKH VSATIGIRNL FDRKYWNWSD VRGIAADSQV LDAYTSSGRT VAVSMKVDF
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