Gene Bamb_4766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4766 
Symbol 
ID4313658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1757905 
End bp1759020 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID638152610 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_776650 
Protein GI115359512 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.816957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGC AGACCCATCC GCTGATTTCC CCCGCCGTCG GCACCGAGCG CCAGATCACG 
AGCTTCCACT ACGGCCCGCG CGGCGGCAAG AAGGTCTACA TCCAGTCGTC GCTGCACGCG
GACGAACTGC CCGGCATGCT GGTCGCCGCG CTGCTGCGCC GCAAGATCGC CGCGCTCGAG
ACGGCCGGCA AGCTGCGCGG CGAAGTGGTC ATCGTCCCGG TGCCGAACCC GATCGGCCTG
TCGCAGCACG TGTTCGGCGA TCATCTCGGC CGCTTCGAGC TCGGCTCGAT GCAGAACTTC
AACCGCAATT TCTACGATCT CGCGGCGCTC GTGCTGCCGC GCATCGAAGG CCGCCTGACG
AACGACGCGC AGCGCAACCT CGCCGCGGTA CGCGCCGCGA TGCGCGAGGC GCTCGACGAG
CAGAAGCCGC GCACCGAGCT GGATTCGCAG CGCCTCGCGC TGCAGAAGCT GTCGTTCGAC
GCCGACATCG TGCTCGACCT GCATTGCGAC AGCGACGCGG TGCTGCACCT CTACACGAAT
CCCGATCTGT GGGAAGACGT CGAGCCGCTT GCGCGCTATC TGGATGCGCA GGCGTCGCTG
CTCGCGCTGA ATTCGGTCGG CAATCCGTTC GACGAGATCC ACAGCTTCTG CTGGTCGGAT
CTGAGCAACC GCTTCGGCGA TCGTTTCCCG ATCCCGAACG GCGCGATTTC CGTCACGGTC
GAACTGCGCA GCGAGCGCGA CGTGTCGTAC GAGTTCGCCG AGAAGGACGC GCAGGGGATC
GTCGAATACC TGACGGAACG CGGCGTCATC GACGGCACGC CCGCGCCGCT GCCGCCGCTC
TCGCATCCGG CCACGCCGCT CGCGGGCACC GATCCGCTCG TGGCCCCCGT GTCGGGCGTG
ATCGTGTTCC GCACGCCGGT CGGCGCATGG ATCGAGGCCG GCCAGGAAGT GGCCGACATC
GTCGATCCGC TGACCGATCG CGTGATCACG CTGAAGAGCA GCGTGTCGGG CGTGCTGTAC
GCGCGCCAGA TCGTGCGCTT CGCGACGGCC GGGATGGAAG TCGCGCGCAT CGCCGGCGCG
ACGCCGATCC GCACCGGGTC GCTGCTGTCG GCCTGA
 
Protein sequence
MQTQTHPLIS PAVGTERQIT SFHYGPRGGK KVYIQSSLHA DELPGMLVAA LLRRKIAALE 
TAGKLRGEVV IVPVPNPIGL SQHVFGDHLG RFELGSMQNF NRNFYDLAAL VLPRIEGRLT
NDAQRNLAAV RAAMREALDE QKPRTELDSQ RLALQKLSFD ADIVLDLHCD SDAVLHLYTN
PDLWEDVEPL ARYLDAQASL LALNSVGNPF DEIHSFCWSD LSNRFGDRFP IPNGAISVTV
ELRSERDVSY EFAEKDAQGI VEYLTERGVI DGTPAPLPPL SHPATPLAGT DPLVAPVSGV
IVFRTPVGAW IEAGQEVADI VDPLTDRVIT LKSSVSGVLY ARQIVRFATA GMEVARIAGA
TPIRTGSLLS A