Gene Bamb_4730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4730 
Symbol 
ID4313622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1724476 
End bp1725522 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content58% 
IMG OID638152574 
Productalcohol dehydrogenase 
Protein accessionYP_776614 
Protein GI115359476 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTC TCGCGAATAC AACGCAGCAT CGGAGCAAGC GCAACATGAA AGCACTCACA 
TTCAAACGCT ATGGCAAATC ACCCGAGATC GGGTTCGCCG AAGTGCCGCG CCCCACGCTC
GAGCCCGACG AACTGCTGGT CGAGGTTCAC GCCGCGGGGG TGAACCCGAT CGACAACATG
ATTCCAACGG GCATGTTCAA ACCCGTCGTG AAGTTCCAGT TGCCCGCGAC CATGGGCAGC
GATCTGGCCG GTATCGTGAT CGATGTCGGC GGCCGCGTCA CTCGCTTCAA GAAAGGCGAC
GCCATATTTG CAAGTCTGTT CGACCTTGGA AGAGGATCCA TCGCCGAATT TGCCGTGGTA
CCGGAGAGCG CTGCAGCCCC GATACCGGTC AATCTGGACT TCGTGCAGGC CGCCTCGGTC
CCCATGGTCG GGCTCACTTC ATGGCAAGCA CTGAAGGAGC GTGCCAATCT TCAGGCGGGT
CAGAAGGTGT TCATTCCCGC GGGGTCCGGC GGTATTGGAA CGTTTGCGAT CCAGCTGGCC
AAATATTTCG CCGCCAAGGT GGGAACCAAT ACCAGCACGG GCAATATCCC GTTGGTGACA
AGCCTCGGCG CGGACGAAGT AATCGACTAC AAGAAGCAAG CGTTCGAGAA AGTGCTGCAC
GACTACGATG TGGCGCTTGG CACGATCAGG GGTGACGCGG TTGAAAAATC GGTAGGAATC
CTGAAGCCGG GCGGTAAGAT CGTCTCTCTT ATCGGGCCGC TGGACGCAGC GTTCGCCCGT
GCTCGCGGGC TGAACTTCAT TCTGCAGTTC GTATTCGGCC TGATGAGCCG CAAGATCATG
CGGCTTGCGA AAAAGCGAGG CGTCACGTAC TCGTTTCTCT TCGTACGCCC CGACGGAGCT
CAACTCGCCG AGATCGGCAA ACTGCTCGAA TCCGAACGTA TCCATCCTGT GATCGACAAG
GTATTTCCGT TTGAACAAGC AAAGGATGCA CTGGAATACC TGGCCCAAGG ACGCGCCAAG
GGCAAGGTCG TCGTCAGGAT CAAGTGA
 
Protein sequence
MKFLANTTQH RSKRNMKALT FKRYGKSPEI GFAEVPRPTL EPDELLVEVH AAGVNPIDNM 
IPTGMFKPVV KFQLPATMGS DLAGIVIDVG GRVTRFKKGD AIFASLFDLG RGSIAEFAVV
PESAAAPIPV NLDFVQAASV PMVGLTSWQA LKERANLQAG QKVFIPAGSG GIGTFAIQLA
KYFAAKVGTN TSTGNIPLVT SLGADEVIDY KKQAFEKVLH DYDVALGTIR GDAVEKSVGI
LKPGGKIVSL IGPLDAAFAR ARGLNFILQF VFGLMSRKIM RLAKKRGVTY SFLFVRPDGA
QLAEIGKLLE SERIHPVIDK VFPFEQAKDA LEYLAQGRAK GKVVVRIK