Gene Bamb_4692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4692 
Symbol 
ID4313584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1678777 
End bp1680138 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content69% 
IMG OID638152536 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_776576 
Protein GI115359438 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0995721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATG AGATTCGCGT GCTGGTCGTC GAGGACGATG AAAACGTCCG GATCGGCGTC 
GAGCAGGCCG TCGCGCTCGC CGGGTTCCCG GTCGACGCGT TCGCGTCGGG CGCCGACGCG
CTCGCGCACG TCGCGCCCGG CGCGCCCATC GTGATCGTGT CGGACGTGCG GATGCCCGGC
ATCGACGGGC TGCAGCTGCT CGAGCGCGTG GTGGCCGTCG ATGCGCAGAT CCCGGTCGTG
CTGATCAGCG GCCACGCCGA CATTTCGACG GCCGTCGGCG CGATGCACGA CGGCGCGTAC
GACTTCATCG AGAAGCCGTT CTCGTCGGAC GTGATCGCCG GCCGCGTCGC GCGCGCGGTC
GAGAAGCGCC GGCTCACGCT GGAGGTGCAG GGGCTGCGCG CGGCGCTCAA CAACTGGCAG
GGCATCGAGG CGTTCGTGCT CGGCAAGTCG CCCGCGATGG CCGACGTGCG CAAGAAGATC
CTGCGCCTCG CCGATACGTC GGTGTCGGTG CTGATCACCG GCGAGACGGG CACCGGCAAG
GAACTGATCG CGCGCAGCCT GCACGACTTC GGCAGCCGGC GCGACGCGCA TTTCGTCGCG
CTGAACTGCG GCGGCCTGCC CGAACAGATT TTCGAGAGCG AGCTGTTCGG CCATGAGGCC
GGCGCATTCA CCGGCGCGAT CAAGAAGCGC ATCGGCAAGA TCGAATGGGC GCACGGCGGC
ACGCTGTTCC TCGACGAGAT CGAGACGATG CCGATTCCGC TGCAGATCAA GATGCTGCGC
GTGCTGCAGG AGCGCGTGGT CGAACGGCTC GGCGCGAACG AGCTGATTCC GGTCGACTGC
CGCGTCGTCG CCGCGTCGAA GGCCGATCTC GCCGAGCTCG CGGCCGACGG ACGCTTCCGC
GCGGACTTGC TGTATCGGCT CAACGTCGCG CAGATCGAGC TGCCGCCGCT GCGCGAACGG
CGCGAGGACG TGCCGCTGCT GTTCGAGCAT TTCGTGCTCG CGGCCGCGCG TCGCTTCGGG
CAGCCGGCGC CCGTCGTCAC GGCTGCGCAG GTGTCCGAAC TGATGACGCA TGCGTGGCCC
GGCAACGTCC GCGAACTGCA GAACGTGGCC GATCGCTTCG TGCTCGGCCT GACCGGCGAC
AGCCTGCTGT CGTCCGGCAG CGCGCCCACG GCGGGCGGCA CGCTCGCGGA GCAGCTCGCG
TATTTCGAGC GGATGCTGAT CGAGGACATG CTCCGGCGTC ACAACGGCAA CGTTGCGGAC
GCAAGCGTTG CACTCGGCAT GCCGAAGAAG ACGCTTTATC ACAAGCTGCG CAACCTGCGG
ATTCCCGCGC GCGGCGACGC GGCGGCCGAC GGCGGCGAAT GA
 
Protein sequence
MEDEIRVLVV EDDENVRIGV EQAVALAGFP VDAFASGADA LAHVAPGAPI VIVSDVRMPG 
IDGLQLLERV VAVDAQIPVV LISGHADIST AVGAMHDGAY DFIEKPFSSD VIAGRVARAV
EKRRLTLEVQ GLRAALNNWQ GIEAFVLGKS PAMADVRKKI LRLADTSVSV LITGETGTGK
ELIARSLHDF GSRRDAHFVA LNCGGLPEQI FESELFGHEA GAFTGAIKKR IGKIEWAHGG
TLFLDEIETM PIPLQIKMLR VLQERVVERL GANELIPVDC RVVAASKADL AELAADGRFR
ADLLYRLNVA QIELPPLRER REDVPLLFEH FVLAAARRFG QPAPVVTAAQ VSELMTHAWP
GNVRELQNVA DRFVLGLTGD SLLSSGSAPT AGGTLAEQLA YFERMLIEDM LRRHNGNVAD
ASVALGMPKK TLYHKLRNLR IPARGDAAAD GGE