Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4692 |
Symbol | |
ID | 4313584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1678777 |
End bp | 1680138 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152536 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_776576 |
Protein GI | 115359438 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0995721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATG AGATTCGCGT GCTGGTCGTC GAGGACGATG AAAACGTCCG GATCGGCGTC GAGCAGGCCG TCGCGCTCGC CGGGTTCCCG GTCGACGCGT TCGCGTCGGG CGCCGACGCG CTCGCGCACG TCGCGCCCGG CGCGCCCATC GTGATCGTGT CGGACGTGCG GATGCCCGGC ATCGACGGGC TGCAGCTGCT CGAGCGCGTG GTGGCCGTCG ATGCGCAGAT CCCGGTCGTG CTGATCAGCG GCCACGCCGA CATTTCGACG GCCGTCGGCG CGATGCACGA CGGCGCGTAC GACTTCATCG AGAAGCCGTT CTCGTCGGAC GTGATCGCCG GCCGCGTCGC GCGCGCGGTC GAGAAGCGCC GGCTCACGCT GGAGGTGCAG GGGCTGCGCG CGGCGCTCAA CAACTGGCAG GGCATCGAGG CGTTCGTGCT CGGCAAGTCG CCCGCGATGG CCGACGTGCG CAAGAAGATC CTGCGCCTCG CCGATACGTC GGTGTCGGTG CTGATCACCG GCGAGACGGG CACCGGCAAG GAACTGATCG CGCGCAGCCT GCACGACTTC GGCAGCCGGC GCGACGCGCA TTTCGTCGCG CTGAACTGCG GCGGCCTGCC CGAACAGATT TTCGAGAGCG AGCTGTTCGG CCATGAGGCC GGCGCATTCA CCGGCGCGAT CAAGAAGCGC ATCGGCAAGA TCGAATGGGC GCACGGCGGC ACGCTGTTCC TCGACGAGAT CGAGACGATG CCGATTCCGC TGCAGATCAA GATGCTGCGC GTGCTGCAGG AGCGCGTGGT CGAACGGCTC GGCGCGAACG AGCTGATTCC GGTCGACTGC CGCGTCGTCG CCGCGTCGAA GGCCGATCTC GCCGAGCTCG CGGCCGACGG ACGCTTCCGC GCGGACTTGC TGTATCGGCT CAACGTCGCG CAGATCGAGC TGCCGCCGCT GCGCGAACGG CGCGAGGACG TGCCGCTGCT GTTCGAGCAT TTCGTGCTCG CGGCCGCGCG TCGCTTCGGG CAGCCGGCGC CCGTCGTCAC GGCTGCGCAG GTGTCCGAAC TGATGACGCA TGCGTGGCCC GGCAACGTCC GCGAACTGCA GAACGTGGCC GATCGCTTCG TGCTCGGCCT GACCGGCGAC AGCCTGCTGT CGTCCGGCAG CGCGCCCACG GCGGGCGGCA CGCTCGCGGA GCAGCTCGCG TATTTCGAGC GGATGCTGAT CGAGGACATG CTCCGGCGTC ACAACGGCAA CGTTGCGGAC GCAAGCGTTG CACTCGGCAT GCCGAAGAAG ACGCTTTATC ACAAGCTGCG CAACCTGCGG ATTCCCGCGC GCGGCGACGC GGCGGCCGAC GGCGGCGAAT GA
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Protein sequence | MEDEIRVLVV EDDENVRIGV EQAVALAGFP VDAFASGADA LAHVAPGAPI VIVSDVRMPG IDGLQLLERV VAVDAQIPVV LISGHADIST AVGAMHDGAY DFIEKPFSSD VIAGRVARAV EKRRLTLEVQ GLRAALNNWQ GIEAFVLGKS PAMADVRKKI LRLADTSVSV LITGETGTGK ELIARSLHDF GSRRDAHFVA LNCGGLPEQI FESELFGHEA GAFTGAIKKR IGKIEWAHGG TLFLDEIETM PIPLQIKMLR VLQERVVERL GANELIPVDC RVVAASKADL AELAADGRFR ADLLYRLNVA QIELPPLRER REDVPLLFEH FVLAAARRFG QPAPVVTAAQ VSELMTHAWP GNVRELQNVA DRFVLGLTGD SLLSSGSAPT AGGTLAEQLA YFERMLIEDM LRRHNGNVAD ASVALGMPKK TLYHKLRNLR IPARGDAAAD GGE
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