Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4687 |
Symbol | |
ID | 4313579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1671479 |
End bp | 1672654 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152531 |
Product | ABC transporter related |
Protein accession | YP_776571 |
Protein GI | 115359433 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00669309 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAC TGTTCGATAC GCTGGGTTTC ATCGAGACAT CGGCCGTGCG GGCCGGCGCG GCGGCACGCG ACGCGCATGG CGCGCATCAG GAAGCCGCCA CGCGGGCTGA CGTCGCCGCC GTGTCGCTCG TCCACGTCGG CAAGGTGTTC GCGACGCCGC GCGGCCACGC CGCCGCGCTG CGCGACGTGA CGTTCGACGT ACGGCGCGGC GAAGTGTTCG GGATCATCGG CCGCAGCGGC GCCGGCAAGT CGACGCTGCT GCGGCTCGTG AACGGGCTCG AACGTCCGAG TTCGGGCAGC GTGCGCGTGC AGGGCGTCGA CGTCGGCGCG CTCGACGAGG ATGGCCTCGT CGCGCTGCGC CGCCGCACCG GGATGGTGTT CCAGCATTTC AACCTGCTGT CGGCGAAGAC GGTGTTCGAG AACGTCGCGC TGCCGCTGAA GATCGCCGGC GTGCCGAAGG CCGAGCGCAC GCGCAAGGTC GATGCGTTGC TCGATCTCGT CGGGCTCGCC GCGAAGCGCG ACGCATATCC GGCGAGCCTG TCGGGTGGCC AGAAGCAGCG CGTCGGTATT GCGCGGGCGC TGGTGCACGA TCCGGAGGTG CTGCTGTGCG ACGAGGCGAC GTCGGCGCTC GATCCCGAGA CGACGCAGTC GATTCTCGCA CTGCTCGCCG ACATCAATCG CCGCCTCGGG CTCACGATCG TGCTGATCAC GCACGAGATG GAAGTGATCC GCGCGGTGTG CGACACGGTC GCGGTGATCG AGCAGGGCGA GCTCGTCGAA ACGGGCCCGG TATGGCGCGT GTTCGGCGAT CCGCGCCACG GCGCGACGCG CGCGCTGCTC AGCACGCTCG TGCACGACCT GCCGGCCGAA CTGGCCGCGC GCGTGCAGCC GTTGCCCGAG CAGGCCGCGC TGCCGGACGG CGCGCAGGTC GTGCTCGACG TCCGCTATAC GGGTGAAAGC GGCGGCGAGC CGGATGTCGG CGCGCTCGCG GCGGCGCTCG GCGGCTCGGT GCGTTTCCTG CATGGCGGGA TCGAGCGGAT CCAGGGGCAT GCGCAGGGGC GCCTCGTGAT CGCCGCGTCG CCCGGGCAGT CGCTGGCACA CGGCGGCGCG GTCGCCGCGT TGCTGGAGCG CGCGCGCCGC CATGCGAATC ACGCGGAGGT GCTCGGCTAT GTTTGA
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Protein sequence | MTQLFDTLGF IETSAVRAGA AARDAHGAHQ EAATRADVAA VSLVHVGKVF ATPRGHAAAL RDVTFDVRRG EVFGIIGRSG AGKSTLLRLV NGLERPSSGS VRVQGVDVGA LDEDGLVALR RRTGMVFQHF NLLSAKTVFE NVALPLKIAG VPKAERTRKV DALLDLVGLA AKRDAYPASL SGGQKQRVGI ARALVHDPEV LLCDEATSAL DPETTQSILA LLADINRRLG LTIVLITHEM EVIRAVCDTV AVIEQGELVE TGPVWRVFGD PRHGATRALL STLVHDLPAE LAARVQPLPE QAALPDGAQV VLDVRYTGES GGEPDVGALA AALGGSVRFL HGGIERIQGH AQGRLVIAAS PGQSLAHGGA VAALLERARR HANHAEVLGY V
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