Gene Bamb_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4687 
Symbol 
ID4313579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1671479 
End bp1672654 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID638152531 
ProductABC transporter related 
Protein accessionYP_776571 
Protein GI115359433 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00669309 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC TGTTCGATAC GCTGGGTTTC ATCGAGACAT CGGCCGTGCG GGCCGGCGCG 
GCGGCACGCG ACGCGCATGG CGCGCATCAG GAAGCCGCCA CGCGGGCTGA CGTCGCCGCC
GTGTCGCTCG TCCACGTCGG CAAGGTGTTC GCGACGCCGC GCGGCCACGC CGCCGCGCTG
CGCGACGTGA CGTTCGACGT ACGGCGCGGC GAAGTGTTCG GGATCATCGG CCGCAGCGGC
GCCGGCAAGT CGACGCTGCT GCGGCTCGTG AACGGGCTCG AACGTCCGAG TTCGGGCAGC
GTGCGCGTGC AGGGCGTCGA CGTCGGCGCG CTCGACGAGG ATGGCCTCGT CGCGCTGCGC
CGCCGCACCG GGATGGTGTT CCAGCATTTC AACCTGCTGT CGGCGAAGAC GGTGTTCGAG
AACGTCGCGC TGCCGCTGAA GATCGCCGGC GTGCCGAAGG CCGAGCGCAC GCGCAAGGTC
GATGCGTTGC TCGATCTCGT CGGGCTCGCC GCGAAGCGCG ACGCATATCC GGCGAGCCTG
TCGGGTGGCC AGAAGCAGCG CGTCGGTATT GCGCGGGCGC TGGTGCACGA TCCGGAGGTG
CTGCTGTGCG ACGAGGCGAC GTCGGCGCTC GATCCCGAGA CGACGCAGTC GATTCTCGCA
CTGCTCGCCG ACATCAATCG CCGCCTCGGG CTCACGATCG TGCTGATCAC GCACGAGATG
GAAGTGATCC GCGCGGTGTG CGACACGGTC GCGGTGATCG AGCAGGGCGA GCTCGTCGAA
ACGGGCCCGG TATGGCGCGT GTTCGGCGAT CCGCGCCACG GCGCGACGCG CGCGCTGCTC
AGCACGCTCG TGCACGACCT GCCGGCCGAA CTGGCCGCGC GCGTGCAGCC GTTGCCCGAG
CAGGCCGCGC TGCCGGACGG CGCGCAGGTC GTGCTCGACG TCCGCTATAC GGGTGAAAGC
GGCGGCGAGC CGGATGTCGG CGCGCTCGCG GCGGCGCTCG GCGGCTCGGT GCGTTTCCTG
CATGGCGGGA TCGAGCGGAT CCAGGGGCAT GCGCAGGGGC GCCTCGTGAT CGCCGCGTCG
CCCGGGCAGT CGCTGGCACA CGGCGGCGCG GTCGCCGCGT TGCTGGAGCG CGCGCGCCGC
CATGCGAATC ACGCGGAGGT GCTCGGCTAT GTTTGA
 
Protein sequence
MTQLFDTLGF IETSAVRAGA AARDAHGAHQ EAATRADVAA VSLVHVGKVF ATPRGHAAAL 
RDVTFDVRRG EVFGIIGRSG AGKSTLLRLV NGLERPSSGS VRVQGVDVGA LDEDGLVALR
RRTGMVFQHF NLLSAKTVFE NVALPLKIAG VPKAERTRKV DALLDLVGLA AKRDAYPASL
SGGQKQRVGI ARALVHDPEV LLCDEATSAL DPETTQSILA LLADINRRLG LTIVLITHEM
EVIRAVCDTV AVIEQGELVE TGPVWRVFGD PRHGATRALL STLVHDLPAE LAARVQPLPE
QAALPDGAQV VLDVRYTGES GGEPDVGALA AALGGSVRFL HGGIERIQGH AQGRLVIAAS
PGQSLAHGGA VAALLERARR HANHAEVLGY V