| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4679 |
|---|
| Symbol | |
|---|
| ID | 4313571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1662619 |
|---|
| End bp | 1664196 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638152523 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_776563 |
|---|
| Protein GI | 115359425 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGA CTGGAGAGAT GCTGATCGGC GCCGACGCGG TGGCCGGCTC GGCCGGTACC
TTGCACGCGT TCGACCCGTC GAAGGGCGCG CCGATCGATG CGCCGGCCTT CGGCGTCGCG
ACGCAGGCCG ACGTCGAGCG CGCGTGCGAA CTCGCGCGTG AGGCCTTCGA CGTGTACCGC
GCCCAGCCGC TCGCGGCCCG CGCGGCGTTT CTCGAAGCGA TCGCCGACGA AATCGTCGCG
CTCGGCGACG CGCTGATCGA ACGCGCGCAC GCCGAAACGG GCCTGCCCGT CGCGCGGCTG
CAGGGCGAGC GCGGCCGCAC CGTCGGCCAG CTCCGCTTGT TCGCGCGCGT CGTGCGCGAC
GGGCGCTTCC TCGCAGCGTC GATCGATCCC GCGCAGCCCG AGCGCACGCC GCTGCCGCGT
TCGGACCTGC GGCTGCAGAA GGTCGGGCTT GGGCCGGTCG TCGTGTTCGG CGCGAGCAAC
TTCCCGCTCG CGTTCTCCGT GGCCGGCGGC GATACCGCGT CGGCGCTGGC GGCCGGCTGC
CCGGTGATCG TGAAGGCCCA TGAGGCGCAC CTCGGCACGT CCGAGCTGGT CGGTCGCGCG
ATCCGCGCGG CGGTGGCGAA GTGCGGGATG CCGGCCGGCG TGTTCTCGCT GATGATTGGC
CCGGGCCGCG TGACCGGCGC GGCGCTCGTC AGTCATCCGG CGATCCAGGC CGTCGGCTTC
ACCGGGTCGC GGCAGGGCGG CATGGCGCTC GTGCAGCTCG CGAACGCGCG TCCGCAGCCG
ATTCCCGTCT ATGCGGAAAT GAGCAGCATC AACCCGGTCG TGCTGTTCCC GGCCGCGCTG
GCCGCGCGCG GCGACGCGAT CGCGACCGGC TTCGTCGATT CGCTGACGCT TGGCGTCGGC
CAGTTCTGTA CGAACCCGGG CCTCGTGCTG GCGATCGACG GTCCCGATCT CGACCGCTTC
GAGTCGGTCG CCGCGCAGGC GCTCGCGAAG AAGCCGGCCG GCGTGATGCT GACGCGCGGC
ATCGCGGACG CGTATCGCAA CGGTCGCGGC AAGCTGGCCG AACTGCCGGG CGTGCGTGAA
ATCGGCGCGG GCGAGACGGC GCAGACCGAA TGCCAGGCAG GCGGCGCGGT GTACGAAGTC
GCCGCGCAGG CGTTCCTGGC GGAGCCGGCA TTCAGCCACG AGGTGTTCGG GCCGGCATCG
CTGATCGTGC GCTGCCGCGA TCTCGACGAA GTCGCGCACG TGCTCGACGC GCTGGAGGGC
CAGCTGACGG CCACGCTGCA GATGGACGCC GACGACAAGC CGCTCGCGCG CCGCCTGCTG
CCGATCCTCG AACGCAAGGC CGGGCGTCTG CTCGTCAACG GCTATCCGAC CGGCGTCGAG
GTGTGCGACG CGATGGTGCA CGGCGGGCCG TTCCCGGCGA CGTCGAATTC GTCCGTCACG
TCGGTCGGCG CGACCGCGAT CGAGCGTTTC CTGCGGCCCG TGTGCTACCA GGACTTCCCG
GACGATCTGC TGCCCGAAGG GCTGCAGGAA AGCAATCCGC TCGCGATTCC GCGGCTGCGG
GACGGCAAGG CGGAGTGA
|
|---|
| Protein sequence | MQLTGEMLIG ADAVAGSAGT LHAFDPSKGA PIDAPAFGVA TQADVERACE LAREAFDVYR
AQPLAARAAF LEAIADEIVA LGDALIERAH AETGLPVARL QGERGRTVGQ LRLFARVVRD
GRFLAASIDP AQPERTPLPR SDLRLQKVGL GPVVVFGASN FPLAFSVAGG DTASALAAGC
PVIVKAHEAH LGTSELVGRA IRAAVAKCGM PAGVFSLMIG PGRVTGAALV SHPAIQAVGF
TGSRQGGMAL VQLANARPQP IPVYAEMSSI NPVVLFPAAL AARGDAIATG FVDSLTLGVG
QFCTNPGLVL AIDGPDLDRF ESVAAQALAK KPAGVMLTRG IADAYRNGRG KLAELPGVRE
IGAGETAQTE CQAGGAVYEV AAQAFLAEPA FSHEVFGPAS LIVRCRDLDE VAHVLDALEG
QLTATLQMDA DDKPLARRLL PILERKAGRL LVNGYPTGVE VCDAMVHGGP FPATSNSSVT
SVGATAIERF LRPVCYQDFP DDLLPEGLQE SNPLAIPRLR DGKAE
|
|---|
| |