Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4666 |
Symbol | |
ID | 4313558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1649545 |
End bp | 1651437 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152510 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_776550 |
Protein GI | 115359412 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.735725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCT CGATCGCCAC CGTGTCACTG TCCGGCACCC TCGCCGAGAA GCTCGCCGCC GTCCAGGCCG CCGGCTTCGA CGGTGTCGAA ATTTTCGAGA ACGACCTCGT CTACTTCGAC GGATCGCCCG CCGACGTGCG GCGCATGGCC GCCGATCTCG GCCTCGACAT CGTGCTGTTC CAGCCGTTTC GCGACTTCGA GGGCGTGAGC CCGGCCCAGC TCGCCCGCAA TCTCGACCGC ATCCGGCGCA AGTTCGACGT GATGCACGCG CTCGGCACCG ACCGCATCCT GGTGTGCAGC AACGTGTCGC CCGACACGAT CGCGGACGAC GCGCTGCTGG TCGACCAGCT CGGCGCGCTC GCCGAAGCCG CGCGGGAGGC TGGCGTGGTC GCCGCGTACG AGGCGCTCGC GTGGGGCCGC GTCGTGAATC GGTACGGCCA TGCGTGGCAG CTGGTGAACG CGGTGAACAG CCCGCACCTC GGCCTCGCGC TCGACAGCTT CCATACGCTG TCGCTCGACG ATTCGCCGGA CGCGATCGCC GACATTCCCG GCGACCGGAT CGCGTTCGTG CAGATCGCCG ATGCGCCGAA GCTCGCGATG GACGTGCTCG AATGGAGCCG CCACTTCCGC TCGTTCCCCG GCCAGGGCGA CTTCGACCTC GCCCGCTTCA CGGCTCGCGT GATCGAGTCC GGCTATACGG GGCCGCTGTC GCTCGAGATC TTCAACGACG GCTTCCGCGC CGCACCGACC GCGATCACGG CCGCCGACGG CCACCGCTCG CTGCTCTATC TGGAAGAACT GACGCGCGCG CGGCTCGCAC AGGACGGCCG CGCGCCGGCC GCCGACCAGC CGCTGTTCGC GCCGCCGGCG CCGCCCGCGC ACGTCGGGTT CCAGTTCATC GAATTCGCGG TCGACGCGCA GGCGGCGGCC ACTGTCGGCG CATGGCTCGG CAAGATGCGG TTCCGGCTCG CGGGCCGCCA TCGGTCGAAG GACGTGACGC TGTTCCAGCA CGGCGCCGCA TCGATCGTGC TGAACGCCGA GCGCGACTCG TTCGCCGATG CGTTCTTCCA GCAGCATGGG TTGTCGCTCT GTGCGTCGGC GTTTCGCGTC GACGATGCGA AGGTAGCGTT CGAACGCGCG GCCGGCTTCG GCTACGCGCC GTTTTCCGGG CGCGTCGGCC CGAATGAGCG CGTGCTGCCG AGCGTGCAGG CGCCGGACGG CAGCCTCGAA TACTTCGTCG ACGAGACGCC GAACGCGCCG ACGCTGTATG AATCGGATTT CGTGCTGACC GACATCGATG GCCCCACCGA AGTCGGGCCG CTGACGGGCA TCGATCACGT GTGCCTCGCG CTGCCGGCGG ACGCGCTCGA TACGTGGATC CTGTTCTTCA AGACTGCATT CGGCTTCGAA GCCGAGCGCA GCTGGCTCGT CCCCGACCCG TACGGCCTGA TGCGCAGCCG GGCGGTGCGC AGCGCGGACG GCTCGGTGCG GATCGCGCTG AATGCGTCGG TCGACCGCCA TACGGCCGTC GCCGAATCGC TGGACCGCTA TCACGGCACG GGGCTGAACC ACGTCGCGTT CCGGACCGAC GACATCGTGA AGACGGTCGC CGCGTTTGCA GCCGACGGCG TGCCGTTCCT GCGGATCCCG CCGAACTACT ACGACGATCT CGCCGCGCGC TACGCGCTGC CGGATGAGCT GATCGACACG CTGAGCGCCC ACCATCTGCT GTACGACCGC GACGAAAACG GCGGCGAATT CCTGCATGCG TATACGGAAC TGGTCGACAA CCGCTTCTCG CTCGAGATCG TCGAGCGGCG CGGCGGCTAC GACGGCTACG GTGCGGCAAA CGCGGCCGTG CGGCTCGCCG CGCAGGCCCA GCGCAGGAAA TAA
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Protein sequence | MQRSIATVSL SGTLAEKLAA VQAAGFDGVE IFENDLVYFD GSPADVRRMA ADLGLDIVLF QPFRDFEGVS PAQLARNLDR IRRKFDVMHA LGTDRILVCS NVSPDTIADD ALLVDQLGAL AEAAREAGVV AAYEALAWGR VVNRYGHAWQ LVNAVNSPHL GLALDSFHTL SLDDSPDAIA DIPGDRIAFV QIADAPKLAM DVLEWSRHFR SFPGQGDFDL ARFTARVIES GYTGPLSLEI FNDGFRAAPT AITAADGHRS LLYLEELTRA RLAQDGRAPA ADQPLFAPPA PPAHVGFQFI EFAVDAQAAA TVGAWLGKMR FRLAGRHRSK DVTLFQHGAA SIVLNAERDS FADAFFQQHG LSLCASAFRV DDAKVAFERA AGFGYAPFSG RVGPNERVLP SVQAPDGSLE YFVDETPNAP TLYESDFVLT DIDGPTEVGP LTGIDHVCLA LPADALDTWI LFFKTAFGFE AERSWLVPDP YGLMRSRAVR SADGSVRIAL NASVDRHTAV AESLDRYHGT GLNHVAFRTD DIVKTVAAFA ADGVPFLRIP PNYYDDLAAR YALPDELIDT LSAHHLLYDR DENGGEFLHA YTELVDNRFS LEIVERRGGY DGYGAANAAV RLAAQAQRRK
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