Gene Bamb_4618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4618 
Symbol 
ID4313510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1583872 
End bp1586058 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content70% 
IMG OID638152457 
Productglycosyl transferase family protein 
Protein accessionYP_776502 
Protein GI115359364 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTTTC TCCGCAACCT TTGGCTTCGC TCCCGTGACG GCACCCGCTC GCTGGGCGCC 
GGCGCGTGGC AACGCCTGCG CCATCCCACG CGCCGCGGCG TCGCGCTGAC GCTCGCCGCG
ATCCCCTTGC TCGGCCTGCT GGTCCTGCTC GCGTTCGTAC CGTTCACGCC GAGCATCGGC
GACATCCGCA AGGCGCGCAT CGACCGTCCC GCGCGCGTGC TGTCGGCCGA CGGCCAACTG
ATCGCAGAAT TCCGGCCCGT CAACCGCGAA TGGGTGCCGC TCAAGCAGAT CTCGCCGCAC
ATGGTCAACG CGCTGATCGC GACCGAGGAC CACCGCTTCT ACGCGCATCA CGGCATCGAC
TGGCGCCGCA CGCTCGCGGC CGGCCTGCAT ACGTTCTCGG GCAGCCGCCA GGGCGGCTCG
ACGATCACGC AGCAGCTCGC GCGCAATCTG TATCCGGATG AAGTCGGCCG CGCGCCGACG
CTCACGCGCA AGATGAAGGA GCTGATCACC GCGTTCAAGA TCGAGACGGT GTACAGCAAG
GACGAGATTC TCGAGACCTA TCTCAACACC GTGCCGTTCC TGTACAACGC GTTCGGCGTC
GAGATGGCCG CGCGCACCTA TTTCAGCAAA TCGGCGGACC AGCTCGACAT CGTCGAAAGC
GCGACGCTGG TCGGGATGCT GAAGGGCAAC AGCTACTACA ACCCGGTGCT GAACCCGGAG
CGGGCGGTCC AGCGCCGCAA CATCGTGCTC GCGCGGATGG CGGCGATGGG CATGCTGTCG
CCGCAGCAGC TCGCGCGATT GCAGCGCCGG CCGCTGCGCG TCGACTTCGA GCCGCAGACG
GCACAGCCCG GCCCGGCTCC GCACTTCGCG GTGCAGCTGC GCAAGTGGCT GATCGCATGG
GCCGACCGGA ACAACTACGA CCTCTACTCG GACGGCCTCG TCGTGCGCAC GACGCTCGAT
GCACGGCTGC AGGACATGGC GACGCAGGCG CTGACCCGGC AGACCGAACG GCTGCAGGCG
GTCGCCGACG GCGCGTGGCG CGGCCCGTCC GGATGCGGGC TGCGCAACGA CCTGTTCCGC
GGCTTCATCC GGCAGACATC CGACTACCGC GACGCGCGCG ATGCAGGGCT CGCCGATGCG
GCGGCACTGA AGCAGCTCGC CTCGAATCGC GCGTTCATGC AGACGTTGTG CGAGCGCAAG
ACGCAGGTGC AGGCCGGCTT CGTCGCGATC GATCCGCGCA ACGGCGCGAT CCGCGCGTGG
GTCGGCAGCC CCGATTTCGG CAGCGAGCCG TTCGATCACG TCACGCAGGC GCGGCGTCAG
CCGGGCTCGA CCTTCAAGCC GTTCGTCTAT GGCGCCGCGT TCGCGGACGG GATGCGCCCG
GGCGATACGT TCGTCGACCG CCCCGTCGCG ATCCCGATCG ACGCGCACAC GGTGTGGCAT
CCGACCGATG CGGAGCCGCC GACCGACGCG CCGATGACGC TGCGCGACGC GCTCGCGCTG
TCGCGCAATC GCATCACCGC GCAGGTGATG CAGCGCGAAG GCGCGGCCAG GGTCGCGCAG
CTCGCGCGTG CGATGGGCGT GCGCGACAGC CCGCTCGACG CGGTGCCGTC GCTCGCGCTC
GGCACGAGCC CCGTCACGCT GAAGGAGATG GTGTCCGCGT ACGGGACGAT CGCGAACCGC
GGCGTGTACG TCGCGCCGCA GATGATCACG CGCATCGAGG ATCGCGACGG CAAGGTGCTC
GCCGCATTCG GCAGCGCGCC GCCCGAACGC GCGCTGCCGG TGGCCGCCGC GCAGACGCTG
GTCGACGTGA TGCGCGGCGT CGTCGATTAC GGGACCGGTG CCGACATTCG CTCGCGCTAC
GGGATTCGCA TCGACGTCGC AGGCAAGACC GGCACGACGC AGGACAACAC GGACGGCTGG
TTCATCCTGA TGCATCCGCA ACTGGTGGCC GGCGCATGGG TCGGCTTCGA CGACGGCAGC
GTGACGCTGC GCAGCGACTA CTGGGGCGCG GGCGCGCACA GTGCATTGCC GATCGTCGGT
TCGTTCTACG ACGCCGCGCT GCGGGCGCGG GCGATCGATC CGCATGAGCA GTTCTCGCCC
GACTTCCGGC CGCGCAGCGC ACCGGCGCCG AAGCGGCGCG CGCCGCAGCA TTCGGGCCTG
TTCGACTGGT TGAGGTTCTT TCGCTGA
 
Protein sequence
MPFLRNLWLR SRDGTRSLGA GAWQRLRHPT RRGVALTLAA IPLLGLLVLL AFVPFTPSIG 
DIRKARIDRP ARVLSADGQL IAEFRPVNRE WVPLKQISPH MVNALIATED HRFYAHHGID
WRRTLAAGLH TFSGSRQGGS TITQQLARNL YPDEVGRAPT LTRKMKELIT AFKIETVYSK
DEILETYLNT VPFLYNAFGV EMAARTYFSK SADQLDIVES ATLVGMLKGN SYYNPVLNPE
RAVQRRNIVL ARMAAMGMLS PQQLARLQRR PLRVDFEPQT AQPGPAPHFA VQLRKWLIAW
ADRNNYDLYS DGLVVRTTLD ARLQDMATQA LTRQTERLQA VADGAWRGPS GCGLRNDLFR
GFIRQTSDYR DARDAGLADA AALKQLASNR AFMQTLCERK TQVQAGFVAI DPRNGAIRAW
VGSPDFGSEP FDHVTQARRQ PGSTFKPFVY GAAFADGMRP GDTFVDRPVA IPIDAHTVWH
PTDAEPPTDA PMTLRDALAL SRNRITAQVM QREGAARVAQ LARAMGVRDS PLDAVPSLAL
GTSPVTLKEM VSAYGTIANR GVYVAPQMIT RIEDRDGKVL AAFGSAPPER ALPVAAAQTL
VDVMRGVVDY GTGADIRSRY GIRIDVAGKT GTTQDNTDGW FILMHPQLVA GAWVGFDDGS
VTLRSDYWGA GAHSALPIVG SFYDAALRAR AIDPHEQFSP DFRPRSAPAP KRRAPQHSGL
FDWLRFFR