| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4617 |
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| Symbol | |
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| ID | 4313509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1582213 |
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| End bp | 1583763 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638152456 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_776501 |
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| Protein GI | 115359363 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.814489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAA CCGCCCGGAT CGTCGAAATC CCGTCGCTCG GCGCGCTCGA CCGCGCGGCC
GGCGACCTGA GCCGTCAGCT CGCGCAGGCG TTGCGGGACG CGGTGCGCCG CGGCGACGTG
CGGCCCGGCG ACACGCTGCC GTCCACGCGC CTGCTCGCGG CATCGCTCGA GGTTGCACGC
GGCACCGTCG TCGACGCGTA TGCGCAGCTC GTCGCCGAAG GCTTCCTGGA GTCGCGCGGC
GGCGCCGGCA CGCGGGTCGC GAACGCGCTG GCCGAACCGC CGCCGGCCGG CGAACCAGCG
GCGGCCCGCC CGCGCGCTGC GCACGCCGGC CTGCCCGAGC CGGCCGCGAC GTTCGCGCGG
ATCGCCCGCG AATTCCGGCC GCTGCCGGCC GCGCCGTTCG CGATCTCGGT GCCGGTCGGG
CTCACCGCGC CCGACGACAT CTGGCGCCGG CTCGGCAACC GGCTGCGCGC ACGCGGTGCC
GGTGCGCCGT CCGGCTATGC GGATCCCCAA GGTGCGTTGC CGCTGCGTGA AGCGATCGCC
GATTACGTGC GCCGCTCGCG CTCGGTGCGC TGCAGCGCCG ATCAGGTCGT GATCACGAGC
GGCACGCAAC AGGGGCTGCA TCTCGCGAGC CAGGTGCTGC TCGGCGCGCA TGATCGCGCG
TGGGTCGAGA ATCCCGCCTA TCGCGGCATC ACCGCGCTGC TCGAGAGCAC CGGGCGCCGC
GACGCGATGG TGCGCGTGCC GGTCGACGCG GACGGCATCG ACGTCGAGGC CGGCATCCGC
ATCGCACCGG ACGCCCGCGC GGCCTTCGTC ACGCCGTCGC ACCAGTACCC GCTCGGGATG
CCGATGAGCA TGGCGCGGCG CAACGCGCTG CTCGGCTGGG CGCGCACACA TCGCGCATGG
GTGGTCGAGG ACGATTACGA CAGCGAGCTG CGCTACGAGG GCTATCCGTT TCCGTCGCTG
CAGGGGCTCG ACCCCGAGCG CGTGGTTTAT CTCGGCACCT TCAGCAAGAT CCTGTTTCCG
TCGCTGCGGC TCGGCTACGT AATCGCGCCC GACGATCTCG TGCCGGCCTT CTGCGGTGCA
CGCGTACTGA TGGATCGCCA TGCGCCGACC GCCGATCAGC ACGTGCTCGC CGCGTTCATC
GCGGAAGGCC ATCTCGACCG CCACATTCGC CGCGTGCGCG GCGTCTACGC GGAACAGCGC
GCGCTGCTGA TCGACACGCT CGGCGCGCGG CTGCCACGCG AGCGCGCATG GGTGCAGCCG
GGAGATCAGG GCATGCACGT GGTGCTGTGG CTCGCGCAAG GGATCGACGA TCTCGACGTG
GTGGCGCGCG CCGCGCAGGC GGGCGTCGCG GTGCGGGCGG TGTCGCCGAT GTTCGCGCCG
GGCACCGAGC GTCCGGGCCT CGTGCTCGGT TTCGGCGGGT TCGATCGTGC GCGGATGGAA
GCGGCCGCCC AGCGGCTCGC GGATGTGGTG GGCGACGCGG CCGGCGCCGA TTCATCCGAC
GAATCGCGAC GCCGCACGCG ATCAAAGGTT GTCCGCGGGC AACAAACGTA A
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| Protein sequence | MARTARIVEI PSLGALDRAA GDLSRQLAQA LRDAVRRGDV RPGDTLPSTR LLAASLEVAR
GTVVDAYAQL VAEGFLESRG GAGTRVANAL AEPPPAGEPA AARPRAAHAG LPEPAATFAR
IAREFRPLPA APFAISVPVG LTAPDDIWRR LGNRLRARGA GAPSGYADPQ GALPLREAIA
DYVRRSRSVR CSADQVVITS GTQQGLHLAS QVLLGAHDRA WVENPAYRGI TALLESTGRR
DAMVRVPVDA DGIDVEAGIR IAPDARAAFV TPSHQYPLGM PMSMARRNAL LGWARTHRAW
VVEDDYDSEL RYEGYPFPSL QGLDPERVVY LGTFSKILFP SLRLGYVIAP DDLVPAFCGA
RVLMDRHAPT ADQHVLAAFI AEGHLDRHIR RVRGVYAEQR ALLIDTLGAR LPRERAWVQP
GDQGMHVVLW LAQGIDDLDV VARAAQAGVA VRAVSPMFAP GTERPGLVLG FGGFDRARME
AAAQRLADVV GDAAGADSSD ESRRRTRSKV VRGQQT
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