| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4567 |
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| Symbol | |
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| ID | 4313459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1518381 |
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| End bp | 1519550 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152406 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_776451 |
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| Protein GI | 115359313 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.747689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCCC CCAAGGTCGT GGTCGAAGGT CTGTGCAAGG TATTTGGAAG TAACCCGCAG
CAGGCGCTCG ACATGCTCGC CGCCGGTGCA ACGAAAGACG ATGTGCTCAA GCGTACCGGT
CAGGTCGTCG GCGTGCACAA CGTATCGTTC GACGTGCAGG AAGGCGAAAT ATTCGTGCTG
ATGGGCCTGT CCGGCTCCGG CAAATCCACG TTGATCCGCC TCGTGAACCG GCTGGTCGAT
CCCAGCGCCG GCAAGGTGCT GATCGACGGG CTCGACGTTG CGTCGGCACG CCGCTCGGAG
TTGACCGCGC TGCGCCGCAA GGACATGAGC ATGGTGTTCC AGTCGTTCGC GCTGATGCCG
CATCGCACCG TGGTGTCGAA CGCCGCGTTC GGCCTCGAGG TCGGCGGCGT CGGCAAGAAG
GAGCGCGAAC GCCGGGCCAT GGACGTGCTC GAGCAGGTCG GTCTCGCACC GTTCGCGCAC
AAGCTGCCGT CCGAGCTGTC GGGCGGGATG CAGCAGCGCG TCGGCCTGGC CCGCGCGCTC
GCCGTGAACC CGTCGCTGAT GATCATGGAC GAGGCGTTCT CCGCGCTCGA TCCGCTCAAG
CGCCGCGAAA TGCAGGACGT GCTGCTGCAA CTGCAGAAGG AACAGCGCCG CACGATCATG
TTCGTGTCGC ACGATCTGGA AGAGGCGCTG CGCATCGGCA ACCGCATCGC GATCATGGAA
GGCGGCCGGC TCGTGCAGGT CGGCACGCCG CAGGACATCA TCGCGAACCC GGCCGACGAC
TACGTGCGCG CGTTCTTCGA CGGCATCGAC ACCAGCCGCT ACCTCACCGC CGGCGACCTG
ATGCAGACGG GTGCCGTGCC GACCATGTCG AAGTTCGATG CAGCGAACGT CGCGGCGACG
CTGAACGGCA GCGCCGAATA CGCGTTCGTG CTCGACGCCG CACGCAAGAT CCGCGGCTTC
GTCACGCGCG ATGCGCTCGG TCAGGACACG CCGTCCGTGC GGCCGATCGA AAGCATCCGG
CGCGACGCGA CGCTCGATCA TGTCGTCGCG CGCGTGGTCG CCAGCCCGAA TGCACTGCCC
GTCGTCGACG ACGACGGCTG TTACTGCGGT TCGGTCGACC GCGCACTCAT CCTGAAAGCC
ATCACGCGTT CGCGAGGTTC CCATGTCTGA
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| Protein sequence | MDAPKVVVEG LCKVFGSNPQ QALDMLAAGA TKDDVLKRTG QVVGVHNVSF DVQEGEIFVL
MGLSGSGKST LIRLVNRLVD PSAGKVLIDG LDVASARRSE LTALRRKDMS MVFQSFALMP
HRTVVSNAAF GLEVGGVGKK ERERRAMDVL EQVGLAPFAH KLPSELSGGM QQRVGLARAL
AVNPSLMIMD EAFSALDPLK RREMQDVLLQ LQKEQRRTIM FVSHDLEEAL RIGNRIAIME
GGRLVQVGTP QDIIANPADD YVRAFFDGID TSRYLTAGDL MQTGAVPTMS KFDAANVAAT
LNGSAEYAFV LDAARKIRGF VTRDALGQDT PSVRPIESIR RDATLDHVVA RVVASPNALP
VVDDDGCYCG SVDRALILKA ITRSRGSHV
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