| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4539 |
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| Symbol | |
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| ID | 4313431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1492030 |
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| End bp | 1492704 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152378 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_776423 |
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| Protein GI | 115359285 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.628549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGAC GGTTTTTCTG GCTGATCGTG CTTTCGCTCG GCATTGCGCA ACAGGCTTCG
GCGCAGCAGG CGCCCGCGCT GCCTGCGTCC GTGCCCGAAG CGGCCGCATC CGCGCCGGCC
GCGGCATCTG CGCCGCTCGC CAACGCCAAC GATCAGCCGA ACGAAGCAAA CCGCCGCATC
ACCTCGTACC TGACGAAGAA ATTCGGTCTC GCGAAGGAGC GCGCCGCGCG GCTCGCCGAT
ATCGTGAGCG TCACTGCGAC GAAATATTCG CTGCCTCCCG CACTCGTTTA CGCGATTATC
TCGATCGAAT CGCGCTTCCA GGAAAAGGCA CGCGGCCAGC ATGGCGCGAC CGGGCTGATG
CAGGTCGTGC CGGCCGCTCA CCGCGGCCTG CTGCGCAACG TGAAGGATCT GACCGAGCCG
AATGCGAACG TCGAGGCCGG CTCCAAGATC CTGTCGGGCT ATGTGCGGGC GGCCGGCGGC
AACGTGCAGG CCGGGCTCAA GAGCTACGGC GGATCGAATG CGTATGCGGC GAAGGTGATG
CAGCGGGTCG ACGCGTTCAG GTTCGTGCTC GAACCTGAAG ACGATGCGAA AGCCGCGAGC
GACGGCAACG CGCACATGGT GCCGGTCAGC GATCCGTCGA CGGCGGCGCC GGCCGCAAGT
CGCGGCGCGA AGTAA
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| Protein sequence | MRRRFFWLIV LSLGIAQQAS AQQAPALPAS VPEAAASAPA AASAPLANAN DQPNEANRRI
TSYLTKKFGL AKERAARLAD IVSVTATKYS LPPALVYAII SIESRFQEKA RGQHGATGLM
QVVPAAHRGL LRNVKDLTEP NANVEAGSKI LSGYVRAAGG NVQAGLKSYG GSNAYAAKVM
QRVDAFRFVL EPEDDAKAAS DGNAHMVPVS DPSTAAPAAS RGAK
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