Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4483 |
Symbol | |
ID | 4313375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1427295 |
End bp | 1428263 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638152322 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_776367 |
Protein GI | 115359229 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGC AATCCCATGC AGCAATCCGC AGGCTCGGCA CGGCGCTCGC CGCGGCTGCA TGCGTGCTGG CGACGCAGCC CGCGCACGCG GCCGATCCGC AGACGTGTCG CGACGTGAAG ATGGCGGCGC CCGGCTGGAC GGACATCGAC GCGACGAACG CGATGGCCGG CGTCGTGCTG AAGGCGCTCG GTTACCGGCA GGACGTCGCG AACCTGTCGG TGCCGATCAC GTACCAGGGC TTGAAGAAAG GGCAGGTGGA CGTGTTCCTC GGCAACTGGA TGCCCGCGCA GGCACCGCTC GTGAAGCCGT TCGTCGACGA GAAGTCGATC GACGTGCTGC ACGCGAACCT GAGCGGTGCG AAGTTCACGC TGGCCGTGCC CGACTACGTC GCGGCCGCGG GCGTGCACAC GTTCGCCGAT CTCGCGCGCT ATGCCGACCG CTTCGGCGAC AAGATCTACG GGATCGAGCC CGGCGCGCCC GCGAACCAGA ACATCAAGCG GATGCTGTCC GACCATGCGC TCGGCCCGGC GAACTGGTCG CTCGTCGAAT CGAGCGAGAC GGGCATGCTC ACGCAGGTCG AGCGTGCGGT GCGCGACAAG CGCTGGATCG TCTTTCTGGC GTGGGAGCCG CATCTGATGA ATACCAAGTT CCACCTCACC TACCTGTCGG GCGGCGACGC GTATTTCGGT CCGAACTACG GCGGCGCGAC GGTCAACACG GTCACGCGCC CGGGCTTTGC CGGCCAGTGT GCGAACCTCG CGCGCCTGTT CCGGCAGATG ACGTTCTCGG TCGACGTCGA AAACCGGATC ATCGCCGACA TGCTCGACCA CAAGACCTCG CCCGCGCTCG CGGCGCAACA CGTGCTGAAG GCCGACCCGG CGCTCGTCGA GGGCTGGCTG GACGGCGTGA CGACCGCGTC CGGCACACCG GCGCTGCCGG CCGTGCGCGC GGCGCTCGAC GCCCGCTGA
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Protein sequence | MKRQSHAAIR RLGTALAAAA CVLATQPAHA ADPQTCRDVK MAAPGWTDID ATNAMAGVVL KALGYRQDVA NLSVPITYQG LKKGQVDVFL GNWMPAQAPL VKPFVDEKSI DVLHANLSGA KFTLAVPDYV AAAGVHTFAD LARYADRFGD KIYGIEPGAP ANQNIKRMLS DHALGPANWS LVESSETGML TQVERAVRDK RWIVFLAWEP HLMNTKFHLT YLSGGDAYFG PNYGGATVNT VTRPGFAGQC ANLARLFRQM TFSVDVENRI IADMLDHKTS PALAAQHVLK ADPALVEGWL DGVTTASGTP ALPAVRAALD AR
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