| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4460 |
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| Symbol | |
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| ID | 4313352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1398390 |
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| End bp | 1399343 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638152299 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_776344 |
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| Protein GI | 115359206 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.401387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGA CAAAGATCGC CGCGTTCGTC GCGGCCATGC TGGCGACCGG CGCGTTCGCG
ACCGCGGCGC AGGCCGAAAC GGATGCCGCG ACCTGCCGGA CCGTACGCTT CGCGGATATC
GGCTGGACCG ACATCACGTC CACGACGGCG CTCGCGTCGA CGGTGTTCGA GGGGCTCGGC
TACAAGCCGA CGACGACGAT TGCGTCGGTG CCGATCTCGT TCGCCGGCCT GAAGAGCAAG
CAGCTCGACG TGTCGCTCGG CTACTGGTGG CCGGTGCAGC AAAAGCAGCT CCAGCCGTTC
CTCGACAGCA AGTCGATCAA CGTGGTCGAG CCGCCGAACC TGTCGGGCGC GAAGGCGACG
CTCGCGGTGC CGAGCTATGA ATACCAGGCC GGCCTGAAGA CCTTCGACGA CATCGCGAAG
CACCGCGCCG AGCTCGACGG CAAGATCTAC GGGATCGAGC CGGGCAGCAG CGCGAACGCG
ACAATCCAGA AGATGATCGA CACGAACCAG TACGGTCTCG GCGGCTTCAA GCTGGTCGAA
TCGAGCGAGG CGGGGATGCT CGTCACGGTC GAGCGCGCGA TCCGCGACAA GAAGTGGGTG
GTCTTCCTGG GATGGGAGCC GCATCCGATG AACATCCAGA TCAGCATGAA CTACCTGTCC
GGCGGCGATG CGTCGTTCGG CCCGAACTAT GGCGAAGCGC GCGTGTACAC GCTGACGGCG
CCCGACTTCA TCTCGCGCTG CCCGAACGCG GGCAAGCTCG TCGAGAACCT GCGCTTTTCG
ACGCAGCTCG AGAACCAACT GATGCAGTCG GTGATGAACA AGACGAAGCC GGCCGACGCC
GCGAAGGCGT ACCTGAAGAA GAATCCGCAG GTGCTCGATG CGTGGCTCGC CGGCGTCAAG
ACGTTCGACG GCAAGGACGG CCTGCCTGCC GTGAAGGCCT ATCTCGGCCT GTAA
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| Protein sequence | MKSTKIAAFV AAMLATGAFA TAAQAETDAA TCRTVRFADI GWTDITSTTA LASTVFEGLG
YKPTTTIASV PISFAGLKSK QLDVSLGYWW PVQQKQLQPF LDSKSINVVE PPNLSGAKAT
LAVPSYEYQA GLKTFDDIAK HRAELDGKIY GIEPGSSANA TIQKMIDTNQ YGLGGFKLVE
SSEAGMLVTV ERAIRDKKWV VFLGWEPHPM NIQISMNYLS GGDASFGPNY GEARVYTLTA
PDFISRCPNA GKLVENLRFS TQLENQLMQS VMNKTKPADA AKAYLKKNPQ VLDAWLAGVK
TFDGKDGLPA VKAYLGL
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