Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4440 |
Symbol | |
ID | 4313333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1377533 |
End bp | 1378873 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638152280 |
Product | major facilitator transporter |
Protein accession | YP_776325 |
Protein GI | 115359187 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.827136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000980879 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGAATT CCAACGGCAT CCCCACGCCG CGCGGCATGC AAACCGGCTC GGACCCGCAT GCGGATGCCA CCGCGCCCGG CATCGACGCG CTGTACACGC GCGTGAGCCG ACGCATCATT CCGCTGATCC TTGTTTGCTA CTTCTTCGGC TATCTCGACC GCGTCAACGT CGGCTTCGCG AAGCTGCAGA TGGTGACGGA CTTGCATCTC ACGGACGCTG CCTACGGCGT CGGCGCCGGT CTGTTCTTCG TCGGCTACCT GCTGCTGCAG GTGCCGGCCG GCTGGCTCGT GCGACGGATC GGCGTGAAGC GTTGTCTCGC CGGCTCGATG CTGACGTGGG GCATCGTGTC GGTCGCCACG CTCGCAACCC GGGACACCGC GAGCTTCTAT GTACTGCGCT TCCTGCTCGG CGTAACGGAA GCGAGCTTCT TTCCGGCCGT GATCGCCTAC TTCAGCGTGT GGTTTCCGTC GCACCGGCTC GCCAAGGTGA TGGCCTTCCT GTTTCTCGCC ATGCCGCTGG GCGTGATCGT CGGCGGCCCG CTGTCGGGCT GGATCATGGA CGCGACGCAT GGCGGCTTCG GGCTGCGCGG CTGGCAGTGG ATGTTCCTGA TCGAAGGCCT GCCGGCCATC GTGCTCGGCA TGTATCTGCT CGTGCGTGTA ACGGAACGGA TCGACGATGC AGCGTGGCTG ACCGACGCGG AAAAACGGAT GATTCGCGCG GAGATGGCCC AGGAAGCGAC AGGCAAGCGC ACCCGCCTCG GCGCCGCGCT GCGCGAACCG ACGCTATGGC TGCTGTTCGC GACATCGTTT CTCTACAACG TCGGCAACTA TGGGCTGGTG TTCTGGATGC CGACGATGAT CAAGGCACTC GGGTCGCTGA GCAACCTCGG AATCGGCCTC GTCAGCGCCA TTCCGTATCT GGTCGCGTCG GTCGCGATGG TCGCGAACGC GCAGCATTCG GTACGAACCG GCGAGCGCCG ATGGCATACG GCGCTGCCCG TCGCGATCGG CGGCGTCGCG CTGCTCGCGA GCCTCGGCGT GCGCACGCAT CCGGTGCTCG CCGTCATGTG CCTGACCGCA GGCGTGGCGG GCATCATGAG CACGCTCGCG ATGTTCTGGA GCTTGCCGTC GCGGATTCTC GCCGGCGAGG CCGCCGCGGG CGGCGCCGGG CTCGTCAACA TCGGCGCGGC CGTCGCCGGG TTCGTCGGAC CGACGCTGAT GGGCTACGCG ACGGGATTGA CCGGCAGCAC TGAACTCGGC GTCGCGCTGC TCGCCTTCAC GCTATTCGCC GCCGCCGCGC TGATCCTGTC GATTCCGCGC CGGCTCATGG TGCGCGCGTG A
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Protein sequence | MTNSNGIPTP RGMQTGSDPH ADATAPGIDA LYTRVSRRII PLILVCYFFG YLDRVNVGFA KLQMVTDLHL TDAAYGVGAG LFFVGYLLLQ VPAGWLVRRI GVKRCLAGSM LTWGIVSVAT LATRDTASFY VLRFLLGVTE ASFFPAVIAY FSVWFPSHRL AKVMAFLFLA MPLGVIVGGP LSGWIMDATH GGFGLRGWQW MFLIEGLPAI VLGMYLLVRV TERIDDAAWL TDAEKRMIRA EMAQEATGKR TRLGAALREP TLWLLFATSF LYNVGNYGLV FWMPTMIKAL GSLSNLGIGL VSAIPYLVAS VAMVANAQHS VRTGERRWHT ALPVAIGGVA LLASLGVRTH PVLAVMCLTA GVAGIMSTLA MFWSLPSRIL AGEAAAGGAG LVNIGAAVAG FVGPTLMGYA TGLTGSTELG VALLAFTLFA AAALILSIPR RLMVRA
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